Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   I5V48_RS10280 Genome accession   NZ_CP065430
Coordinates   2178077..2179336 (-) Length   419 a.a.
NCBI ID   WP_023371637.1    Uniprot ID   A0A0Z8F6A2
Organism   Streptococcus suis strain YZDH1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2173077..2184336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5V48_RS10260 (I5V48_10260) dhaL 2173890..2174465 (+) 576 WP_174850244.1 dihydroxyacetone kinase subunit DhaL -
  I5V48_RS10265 (I5V48_10265) dhaM 2174462..2174836 (+) 375 WP_044759585.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  I5V48_RS10270 (I5V48_10270) - 2174846..2175559 (+) 714 WP_170238330.1 MIP/aquaporin family protein -
  I5V48_RS10275 (I5V48_10275) - 2175774..2177636 (-) 1863 WP_174850243.1 proline--tRNA ligase -
  I5V48_RS10280 (I5V48_10280) eeP 2178077..2179336 (-) 1260 WP_023371637.1 RIP metalloprotease RseP Regulator
  I5V48_RS10285 (I5V48_10285) - 2179346..2180152 (-) 807 WP_043027221.1 phosphatidate cytidylyltransferase -
  I5V48_RS10290 (I5V48_10290) - 2180162..2180917 (-) 756 WP_029175090.1 isoprenyl transferase -
  I5V48_RS10295 (I5V48_10295) - 2181149..2181741 (+) 593 Protein_2013 IS66 family transposase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44889.21 Da        Isoelectric Point: 5.6974

>NTDB_id=509534 I5V48_RS10280 WP_023371637.1 2178077..2179336(-) (eeP) [Streptococcus suis strain YZDH1]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFIILFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=509534 I5V48_RS10280 WP_023371637.1 2178077..2179336(-) (eeP) [Streptococcus suis strain YZDH1]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGAACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCTTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTATCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTTGAAGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGGACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTATTTTGTTCTTCATGCAAGGTGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCGGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGATAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTTGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCCGAACAAGTAGATGGGGCTTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCGGCTGAATTTGGTTTGGTTTCTGTGTT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TGATGAATATCCTAGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Z8F6A2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.238

100

0.654

  eeP Streptococcus thermophilus LMD-9

65.238

100

0.654