Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   KU513_RS01990 Genome accession   NZ_CP077872
Coordinates   353369..354643 (-) Length   424 a.a.
NCBI ID   WP_050956547.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 358     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 348369..359643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU513_RS01975 (KU513_01975) - 350654..350746 (+) 93 WP_001789987.1 hypothetical protein -
  KU513_RS01980 (KU513_01980) - 350726..351631 (-) 906 WP_000184370.1 transglycosylase domain-containing protein -
  KU513_RS01985 (KU513_01985) tyrS 352013..353275 (+) 1263 WP_031794050.1 tyrosine--tRNA ligase -
  KU513_RS01990 (KU513_01990) htrA 353369..354643 (-) 1275 WP_050956547.1 S1C family serine protease Regulator
  KU513_RS01995 (KU513_01995) - 354815..355432 (+) 618 WP_000287588.1 lysophospholipid acyltransferase family protein -
  KU513_RS02000 (KU513_02000) nagE 355560..357026 (+) 1467 WP_000276370.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  KU513_RS02005 (KU513_02005) - 357133..358263 (+) 1131 WP_000721707.1 HAD family hydrolase -
  KU513_RS02010 (KU513_02010) - 358224..358319 (-) 96 WP_001789986.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45759.96 Da        Isoelectric Point: 9.8964

>NTDB_id=509475 KU513_RS01990 WP_050956547.1 353369..354643(-) (htrA) [Staphylococcus aureus strain 358]
MSDFNHTDHSTTNHSQTPRYRIPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDREDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=509475 KU513_RS01990 WP_050956547.1 353369..354643(-) (htrA) [Staphylococcus aureus strain 358]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAATACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATTATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTTCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCTGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTTGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGCGAACGTACGATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTTAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCTATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGAGAAGACGGTATTTATGTCGCCAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

39.152

94.575

0.37