Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   I5776_RS14265 Genome accession   NZ_CP065425
Coordinates   2845190..2845375 (-) Length   61 a.a.
NCBI ID   WP_202777051.1    Uniprot ID   -
Organism   Heyndrickxia vini strain JCM 19841     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2840190..2850375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5776_RS14235 (I5776_14230) - 2840674..2841531 (+) 858 WP_202777045.1 nuclease-related domain-containing protein -
  I5776_RS14240 (I5776_14235) - 2841575..2841856 (-) 282 WP_202777046.1 hypothetical protein -
  I5776_RS14245 (I5776_14240) - 2841866..2842129 (-) 264 WP_202777047.1 hypothetical protein -
  I5776_RS14250 (I5776_14245) fabF 2842309..2843547 (-) 1239 WP_202777048.1 beta-ketoacyl-ACP synthase II -
  I5776_RS14255 (I5776_14250) - 2843639..2844577 (-) 939 WP_202777049.1 beta-ketoacyl-ACP synthase III -
  I5776_RS14260 (I5776_14255) - 2844782..2845138 (+) 357 WP_202777050.1 hypothetical protein -
  I5776_RS14265 (I5776_14260) comZ 2845190..2845375 (-) 186 WP_202777051.1 ComZ family protein Regulator
  I5776_RS14270 (I5776_14265) - 2845395..2846341 (-) 947 Protein_2796 BMP family ABC transporter substrate-binding protein -
  I5776_RS14275 (I5776_14270) - 2846430..2847230 (-) 801 WP_202777052.1 hypothetical protein -
  I5776_RS14280 (I5776_14275) - 2847251..2847967 (-) 717 WP_202777053.1 hydrolase -
  I5776_RS14285 (I5776_14280) - 2848223..2848405 (+) 183 WP_202777054.1 YjzD family protein -

Sequence

Protein


Download         Length: 61 a.a.        Molecular weight: 7107.27 Da        Isoelectric Point: 4.3355

>NTDB_id=509460 I5776_RS14265 WP_202777051.1 2845190..2845375(-) (comZ) [Heyndrickxia vini strain JCM 19841]
MNQEKSMEFMQIAMKYLPEAKEKLDQAGVEISFELLQPFMELFTNVMNEAYELGKKDALSK

Nucleotide


Download         Length: 186 bp        

>NTDB_id=509460 I5776_RS14265 WP_202777051.1 2845190..2845375(-) (comZ) [Heyndrickxia vini strain JCM 19841]
ATGAATCAAGAAAAATCAATGGAATTTATGCAAATTGCGATGAAATACTTACCAGAGGCAAAAGAGAAACTAGATCAAGC
GGGTGTTGAAATTTCGTTTGAATTACTACAACCCTTCATGGAGCTCTTTACTAATGTAATGAATGAGGCATATGAATTAG
GGAAAAAAGATGCGTTAAGTAAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70

98.361

0.689