Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I5961_RS26550 Genome accession   NZ_CP065410
Coordinates   5790932..5791336 (-) Length   134 a.a.
NCBI ID   WP_007953330.1    Uniprot ID   Q3K5A9
Organism   Pseudomonas sp. IAC-BECa141     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5785932..5796336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5961_RS26535 (I5961_26375) - 5787882..5789942 (-) 2061 WP_085702899.1 methyl-accepting chemotaxis protein -
  I5961_RS26540 (I5961_26380) - 5789956..5790495 (-) 540 WP_085689623.1 chemotaxis protein CheW -
  I5961_RS26545 (I5961_26385) pilH 5790506..5790871 (-) 366 WP_011336365.1 twitching motility response regulator PilH -
  I5961_RS26550 (I5961_26390) pilG 5790932..5791336 (-) 405 WP_007953330.1 twitching motility response regulator PilG Regulator
  I5961_RS26555 (I5961_26395) gshB 5791561..5792511 (+) 951 WP_085697846.1 glutathione synthase -
  I5961_RS26560 (I5961_26400) - 5792619..5793518 (+) 900 WP_085697847.1 energy transducer TonB -
  I5961_RS26565 (I5961_26405) - 5793688..5794260 (+) 573 WP_085689619.1 YqgE/AlgH family protein -
  I5961_RS26570 (I5961_26410) ruvX 5794260..5794697 (+) 438 WP_007953334.1 Holliday junction resolvase RuvX -
  I5961_RS26575 (I5961_26415) pyrR 5794779..5795282 (+) 504 WP_011336369.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  I5961_RS26580 (I5961_26420) - 5795310..5796314 (+) 1005 WP_007913665.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14532.86 Da        Isoelectric Point: 6.7107

>NTDB_id=509245 I5961_RS26550 WP_007953330.1 5790932..5791336(-) (pilG) [Pseudomonas sp. IAC-BECa141]
MEQQSSALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNNAFK
GTPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLDAISAHVPGFAAALPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=509245 I5961_RS26550 WP_007953330.1 5790932..5791336(-) (pilG) [Pseudomonas sp. IAC-BECa141]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGTCGCACCGCCGAGACCCTGTT
GAAAAATGCAGGGTGCGAAGTCATCACCGCGATCGACGGTTTTGATGCCTTGGCGAAGATCGCCGACCACCATCCCGGGA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAACGCGTTCAAG
GGCACGCCGGTGATCATGCTGTCGTCCCGGGACGGGTTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCGACGCGATTTCGGCCCATGTTCCGGGCTTCGCTGCCGCTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q3K5A9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694