Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I3K84_RS16705 Genome accession   NZ_CP065406
Coordinates   3517841..3518233 (+) Length   130 a.a.
NCBI ID   WP_011806675.1    Uniprot ID   A0A6M6I9J5
Organism   Diaphorobacter sp. JS3051     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3512841..3523233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I3K84_RS16685 (I3K84_16685) - 3513346..3515106 (-) 1761 WP_196995014.1 alkaline phosphatase -
  I3K84_RS16690 (I3K84_16690) hemL 3515289..3516593 (-) 1305 WP_196995015.1 glutamate-1-semialdehyde 2,1-aminomutase -
  I3K84_RS16695 (I3K84_16695) - 3516577..3517521 (-) 945 WP_015914197.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  I3K84_RS16700 (I3K84_16700) - 3517637..3517789 (+) 153 WP_011806676.1 rubredoxin -
  I3K84_RS16705 (I3K84_16705) pilG 3517841..3518233 (+) 393 WP_011806675.1 PleD family two-component system response regulator Regulator
  I3K84_RS16710 (I3K84_16710) - 3518245..3518610 (+) 366 WP_011806674.1 PleD family two-component system response regulator -
  I3K84_RS16715 (I3K84_16715) - 3518627..3519154 (+) 528 WP_047349731.1 chemotaxis protein CheW -
  I3K84_RS16720 (I3K84_16720) - 3519176..3521440 (+) 2265 WP_196995016.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14430.55 Da        Isoelectric Point: 6.4477

>NTDB_id=509219 I3K84_RS16705 WP_011806675.1 3517841..3518233(+) (pilG) [Diaphorobacter sp. JS3051]
MATTTTGPTFRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNAH
FADTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNAQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=509219 I3K84_RS16705 WP_011806675.1 3517841..3518233(+) (pilG) [Diaphorobacter sp. JS3051]
TTGGCTACGACGACGACCGGTCCCACCTTCCGTGTCCTGGTGGTGGACGACAGCAATACCATACGGCGCAGCGCCGAAAT
TTTCCTCAAGCAGGGAGGGCACGAGGTTTTATTGGCCGACGATGGTTTCGATGCCTTGGCCAAAGTCAATGATTACCAGC
CTCAGCTGATTTTCTGCGACATCCTCATGCCCAAGCTGGATGGTTATCAGACCTGCGCCATCATCAAACGCAACGCGCAT
TTTGCTGATACGCCCGTGGTAATGCTTTCATCCAAGGACGGGGTTTTCGATAAGGCGCGCGGCCGCATGGTCGGTTGCCA
GGAATATCTGACCAAACCATTTACCAAAGACCAGTTGCTGCAGGCTGTGCAGCAATTTGGAAATGCCCAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6M6I9J5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

56.41

90

0.508