Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ST1A_RS07840 Genome accession   NZ_CP065384
Coordinates   1523197..1524273 (-) Length   358 a.a.
NCBI ID   WP_022096499.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain 1A     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1518197..1529273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST1A_RS07820 (ST1A_07770) - 1519309..1521375 (-) 2067 WP_011681548.1 sodium:proton antiporter -
  ST1A_RS07825 (ST1A_07775) - 1521384..1521626 (-) 243 WP_011226461.1 hypothetical protein -
  ST1A_RS07830 (ST1A_07780) - 1521623..1522171 (-) 549 WP_011226462.1 class I SAM-dependent methyltransferase -
  ST1A_RS07835 (ST1A_07785) - 1522168..1523112 (-) 945 WP_011226463.1 TIGR01212 family radical SAM protein -
  ST1A_RS07840 (ST1A_07790) sepM 1523197..1524273 (-) 1077 WP_022096499.1 SepM family pheromone-processing serine protease Regulator
  ST1A_RS07845 (ST1A_07795) coaD 1524251..1524748 (-) 498 WP_011681550.1 pantetheine-phosphate adenylyltransferase -
  ST1A_RS07850 (ST1A_07800) rsmD 1524781..1525380 (-) 600 Protein_1493 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ST1A_RS07855 (ST1A_07805) trxB 1525471..1526424 (-) 954 WP_347229853.1 thioredoxin-disulfide reductase -
  ST1A_RS07860 (ST1A_07810) - 1526457..1526681 (-) 225 WP_002951743.1 DUF4059 family protein -
  ST1A_RS07865 (ST1A_07815) - 1526896..1527639 (-) 744 WP_084829826.1 amino acid ABC transporter ATP-binding protein -
  ST1A_RS07870 (ST1A_07820) - 1527639..1528385 (-) 747 WP_232992609.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39202.09 Da        Isoelectric Point: 9.4944

>NTDB_id=509106 ST1A_RS07840 WP_022096499.1 1523197..1524273(-) (sepM) [Streptococcus thermophilus strain 1A]
MANKTKSKSLLEKMWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVNKKADDSKGSYNFVAVAQTKAT
LALMLYAQFNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAVYQGLTLAGKEVSLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDMIKYVQGLKLGSKVKVTYMRDGKEKTATGKIIKIANGKNGIGIGLTDHTEIKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNLVTKEMKKADPD
AKTNYQEAKEAAEKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=509106 ST1A_RS07840 WP_022096499.1 1523197..1524273(-) (sepM) [Streptococcus thermophilus strain 1A]
GTGGCAAACAAGACAAAATCTAAATCGCTATTAGAGAAAATGTGGCGTATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ACTTTTCCTCCTTTTTGCCCTCTTTTTCCCGCTCAATAATTACTATGTGGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACAGTGAATAAGAAAGCTGATGATTCTAAGGGCTCCTATAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGTTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGTATCAACCAATTTTACATGGAGACTTCTCAAAACCAAGCGGTTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGTTAGTTTGGAGTATATGGGTGTCTATGTGCTTCAGGTTGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCTGATACGGTGACGGCTGTTAATGGTAAGACCTTTGATAATTCTACTGACATGATTAAATACGTTCAAGGACTTAA
GCTGGGTTCAAAGGTCAAGGTCACTTATATGAGAGATGGCAAAGAAAAGACTGCTACTGGTAAGATTATTAAGATTGCCA
ATGGCAAAAATGGTATTGGTATCGGCCTAACGGACCATACTGAGATCAAGAGTCCTGAGAATGTTAAGTTTAAACTGGAT
GGTGTCGGTGGGCCAAGTGCTGGTCTTATGTTTACCTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGCAAGATTGCTGGTACAGGAACTATTGAAAAAGATGGGGCTGTCGGTGATATCGGTGGGGCCTATCTCAAGGTGAAAT
CTGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCTAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCTGAGAAACTGGGGACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATGA

Domains


Predicted by InterproScan.

(137-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

63.05

95.251

0.601