Detailed information NTG0508912

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: I5M77_RS23675
• Genome accession: NZ_CP065370
• Coordinates: 1433966..1435063 (+)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus strain 20-082A3
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1428966..1440063

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I5M77_RS23640 (I5M77_23640)	-	1429103..1430080 (+)	978	WP_025790806.1	Gfo/Idh/MocA family protein	-
I5M77_RS23645 (I5M77_23645)	-	1430154..1431491 (-)	1338	WP_025790808.1	MATE family efflux transporter	-
I5M77_RS23650 (I5M77_23650)	-	1431614..1431928 (-)	315	WP_005453573.1	DUF496 family protein	-
I5M77_RS23655 (I5M77_23655)	-	1432093..1432248 (+)	156	WP_196952920.1	hypothetical protein	-
I5M77_RS23660 (I5M77_23660)	-	1432255..1432470 (+)	216	WP_196952926.1	hypothetical protein	-
I5M77_RS23665 (I5M77_23665)	-	1432647..1433297 (+)	651	WP_017447360.1	YceH family protein	-
I5M77_RS23670 (I5M77_23670)	-	1433294..1433614 (+)	321	WP_023623674.1	GIY-YIG nuclease family protein	-
I5M77_RS23675 (I5M77_23675)	luxP	1433966..1435063 (+)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
I5M77_RS23680 (I5M77_23680)	luxQ	1435063..1437639 (+)	2577	WP_140137138.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
I5M77_RS23685 (I5M77_23685)	-	1437851..1438306 (+)	456	WP_005477342.1	MarR family transcriptional regulator	-
I5M77_RS23690 (I5M77_23690)	-	1438345..1439400 (+)	1056	WP_015313427.1	HlyD family secretion protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=508912 I5M77_RS23675 WP_005463467.1 1433966..1435063(+) (luxP) [Vibrio parahaemolyticus strain 20-082A3]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=508912 I5M77_RS23675 WP_005463467.1 1433966..1435063(+) (luxP) [Vibrio parahaemolyticus strain 20-082A3]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTCCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTACCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCTGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCGAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTAAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACATGTTTTAGATTCCACCAAAACCAAACTTATCTTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCATCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCAGCAAAAGCCAGCTTGAAAAAGTACCCAGATGTCGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTAATGATCAATGGCTGGGGTGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAACCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGATAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: Q87GU4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644