Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   I5Q61_RS04835 Genome accession   NZ_CP065357
Coordinates   968495..969679 (-) Length   394 a.a.
NCBI ID   WP_066776893.1    Uniprot ID   A0A6A7JST6
Organism   Campylobacter hepaticus strain UF2019SK1     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 963495..974679
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5Q61_RS04810 (I5Q61_04810) fliL 964663..965196 (+) 534 WP_066776907.1 flagellar basal body-associated protein FliL -
  I5Q61_RS04815 (I5Q61_04815) acpS 965196..965543 (+) 348 WP_066776904.1 holo-ACP synthase -
  I5Q61_RS04820 (I5Q61_04820) - 965545..965946 (-) 402 WP_066776902.1 hypothetical protein -
  I5Q61_RS04825 (I5Q61_04825) - 965943..967313 (-) 1371 WP_066776899.1 cytochrome P450 -
  I5Q61_RS04830 (I5Q61_04830) - 967310..968428 (-) 1119 WP_152778931.1 DUF829 domain-containing protein -
  I5Q61_RS04835 (I5Q61_04835) kpsS 968495..969679 (-) 1185 WP_066776893.1 capsule biosynthesis protein Regulator
  I5Q61_RS04840 (I5Q61_04840) - 969676..971745 (-) 2070 WP_196913881.1 capsular polysaccharide biosynthesis protein -
  I5Q61_RS04845 (I5Q61_04845) - 971755..972807 (-) 1053 WP_083074275.1 phosphonoacetaldehyde reductase -
  I5Q61_RS04850 (I5Q61_04850) aepY 972800..973996 (-) 1197 WP_066776884.1 phosphonopyruvate decarboxylase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 47008.92 Da        Isoelectric Point: 10.0512

>NTDB_id=508831 I5Q61_RS04835 WP_066776893.1 968495..969679(-) (kpsS) [Campylobacter hepaticus strain UF2019SK1]
MRFSDKIKKEFSDKNVLLLQGPVGNFFHKLAIKMQKNKTKVFKLNFNGGDFFFYPSGIRCKCHEVELENFYENFLKTKKI
DAIIMYNDCRIIHAKAIKIAKRLNLAIWIFEEGYLRPYCITLEQNGVNANSFLPKDKNFYLYQNICTKDSIKEIPGSFKF
IAFDAFLYWLFAFLLAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNKKIYNLDKKYFLAILQVYNDTQIKYH
YKKSIEYFIEEIILSFANHARAKSYLVFKHHPMDRGYKNYTRLIQNLSQKYHVEGRVLYVHDTHLPTLLKKALGCITINS
TVGFSAILEGCPTKVCGNAFYDFEGLTYPRKLQFFWREAHAYKPNPILTINFKAYLLQTNQFNGNFYKNSFLNK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=508831 I5Q61_RS04835 WP_066776893.1 968495..969679(-) (kpsS) [Campylobacter hepaticus strain UF2019SK1]
ATGAGATTTAGTGACAAAATTAAAAAAGAATTTAGTGATAAAAATGTTTTACTTTTGCAAGGTCCTGTAGGGAATTTCTT
TCATAAACTTGCTATAAAAATGCAAAAAAATAAAACTAAAGTTTTTAAATTAAATTTTAATGGTGGAGATTTTTTTTTCT
ATCCAAGTGGTATACGATGTAAATGTCATGAAGTAGAGCTTGAAAATTTTTATGAAAATTTTTTAAAAACTAAAAAAATT
GATGCTATTATTATGTATAATGATTGTCGTATTATCCATGCTAAAGCTATTAAAATAGCTAAACGATTAAATCTTGCAAT
TTGGATTTTTGAAGAGGGGTATTTAAGACCTTATTGCATTACTTTGGAGCAAAATGGGGTTAATGCTAATTCTTTTTTGC
CTAAAGACAAGAATTTTTATCTTTACCAAAATATTTGTACAAAAGACAGTATCAAAGAAATTCCTGGTAGTTTTAAATTT
ATAGCTTTTGATGCTTTTTTATATTGGTTATTTGCTTTTCTTTTAGCCCCATTTTTTAATAATAAGCTTCATCATAGAAC
TTTATATCCTTTTGAGTTTTTATTTTGGTTTAGATCTTTATATAGAAAATATCTTTACAAAATTACAGAAAAAAAACTCA
ATAAAAAAATTTATAATTTAGATAAAAAATATTTTTTAGCAATTTTACAAGTTTATAATGATACCCAAATTAAATATCAT
TATAAAAAAAGCATAGAATATTTTATAGAAGAAATCATACTTTCTTTTGCAAATCATGCAAGGGCTAAGTCTTATCTTGT
TTTTAAGCATCATCCTATGGATAGAGGATATAAAAATTATACAAGATTGATACAAAATTTAAGTCAAAAATATCATGTTG
AAGGTAGGGTTTTATATGTGCATGATACGCATTTGCCAACCCTTTTAAAAAAAGCTTTAGGTTGCATTACTATTAATTCC
ACAGTAGGTTTTAGTGCTATTTTAGAAGGATGTCCAACTAAGGTTTGTGGGAATGCTTTTTATGATTTTGAGGGTTTAAC
TTATCCTAGGAAATTGCAGTTTTTTTGGAGAGAAGCCCATGCTTATAAACCCAATCCTATTTTAACAATTAATTTTAAAG
CTTATCTTTTACAAACTAATCAATTTAATGGTAATTTTTATAAAAATTCTTTTTTGAATAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6A7JST6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

86.548

100

0.865