Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   I5Q61_RS03300 Genome accession   NZ_CP065357
Coordinates   666662..667096 (-) Length   144 a.a.
NCBI ID   WP_066776745.1    Uniprot ID   A0A424Z019
Organism   Campylobacter hepaticus strain UF2019SK1     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 661662..672096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5Q61_RS03285 (I5Q61_03285) ispG 662185..663255 (-) 1071 WP_066776748.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -
  I5Q61_RS03290 (I5Q61_03290) - 663412..664816 (+) 1405 Protein_640 DUF2972 domain-containing protein -
  I5Q61_RS03295 (I5Q61_03295) - 664827..666680 (-) 1854 WP_083074271.1 primosomal protein N' -
  I5Q61_RS03300 (I5Q61_03300) Cj0683 666662..667096 (-) 435 WP_066776745.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  I5Q61_RS03305 (I5Q61_03305) - 667093..667335 (-) 243 WP_066776742.1 hypothetical protein -
  I5Q61_RS03310 (I5Q61_03310) - 667325..667555 (-) 231 WP_066776739.1 hypothetical protein -
  I5Q61_RS03315 (I5Q61_03315) uvrB 667717..669690 (+) 1974 WP_066776736.1 excinuclease ABC subunit UvrB -
  I5Q61_RS03320 (I5Q61_03320) - 669731..670981 (-) 1251 WP_066776734.1 RNA polymerase factor sigma-54 -
  I5Q61_RS03325 (I5Q61_03325) lptB 670981..671709 (-) 729 WP_066776859.1 LPS export ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16972.04 Da        Isoelectric Point: 8.4653

>NTDB_id=508821 I5Q61_RS03300 WP_066776745.1 666662..667096(-) (Cj0683) [Campylobacter hepaticus strain UF2019SK1]
MKKAFTLLELIFVILIIGILTSLSSSFINITKDEVKILKLKTDYEMLNSALTLMRTQMQLKNLDFPSILDHARINHAREK
LFYCNDCGYSLLDTPIYSDFKFWMKIDKNHYSFFLNSKESIKFVYDPKEGLFKCLESFRCKDLI

Nucleotide


Download         Length: 435 bp        

>NTDB_id=508821 I5Q61_RS03300 WP_066776745.1 666662..667096(-) (Cj0683) [Campylobacter hepaticus strain UF2019SK1]
ATGAAAAAAGCATTTACTTTGCTTGAACTTATTTTTGTAATATTAATTATAGGAATTTTAACGAGTTTGTCTTCATCTTT
TATAAATATTACTAAAGATGAAGTAAAAATATTAAAATTAAAAACAGATTATGAAATGTTAAATTCTGCTCTTACTTTAA
TGCGTACTCAAATGCAACTTAAAAATTTAGATTTCCCTAGTATCTTAGATCATGCAAGAATTAACCATGCTAGAGAAAAA
CTTTTTTATTGTAATGATTGTGGATATTCTTTGTTGGATACACCTATTTATTCTGATTTTAAATTTTGGATGAAAATTGA
TAAAAATCATTATAGTTTTTTCTTAAATTCTAAAGAATCGATTAAATTTGTTTATGATCCTAAAGAAGGCTTGTTTAAAT
GTTTGGAAAGTTTTAGATGCAAAGACTTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A424Z019

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

75.862

100

0.764