Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   I5044_RS12880 Genome accession   NZ_CP065354
Coordinates   2635104..2635991 (-) Length   295 a.a.
NCBI ID   WP_000143429.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JW_comp_novo     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2630104..2640991
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5044_RS12850 (I5044_12850) - 2630112..2630204 (+) 93 WP_031927345.1 hypothetical protein -
  I5044_RS12855 (I5044_12855) - 2630312..2630809 (-) 498 WP_001065267.1 glutathione peroxidase -
  I5044_RS12860 (I5044_12860) - 2630819..2631079 (-) 261 WP_011382405.1 hypothetical protein -
  I5044_RS12865 (I5044_12865) - 2631461..2631574 (-) 114 WP_072468803.1 hypothetical protein -
  I5044_RS12870 (I5044_12870) - 2632244..2634244 (-) 2001 WP_000776724.1 ABC transporter permease -
  I5044_RS12875 (I5044_12875) - 2634241..2634996 (-) 756 WP_000923766.1 ABC transporter ATP-binding protein -
  I5044_RS12880 (I5044_12880) braS 2635104..2635991 (-) 888 WP_000143429.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  I5044_RS12885 (I5044_12885) braR 2636002..2636667 (-) 666 WP_000697879.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  I5044_RS12890 (I5044_12890) - 2636693..2636893 (-) 201 WP_000604729.1 hypothetical protein -
  I5044_RS12895 (I5044_12895) - 2637091..2638514 (+) 1424 Protein_2511 alkaline phosphatase -
  I5044_RS13570 - 2638574..2638675 (-) 102 WP_000731972.1 SE2200 family small protein -
  I5044_RS12905 (I5044_12905) - 2638797..2639252 (-) 456 WP_000106183.1 MarR family winged helix-turn-helix transcriptional regulator -
  I5044_RS12910 (I5044_12910) - 2639498..2640259 (-) 762 WP_000323444.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34061.32 Da        Isoelectric Point: 5.8962

>NTDB_id=508766 I5044_RS12880 WP_000143429.1 2635104..2635991(-) (braS) [Staphylococcus aureus strain JW_comp_novo]
MTFLKSITQEIAIVIVIFSLFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=508766 I5044_RS12880 WP_000143429.1 2635104..2635991(-) (braS) [Staphylococcus aureus strain JW_comp_novo]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTTCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATCGATAATTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGGCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.983

100

0.99