Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   SAIN_RS02095 Genome accession   NC_022244
Coordinates   420000..420776 (-) Length   258 a.a.
NCBI ID   WP_003025796.1    Uniprot ID   -
Organism   Streptococcus anginosus C1051     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 415000..425776
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAIN_RS02065 (SAIN_0404) - 415372..416367 (+) 996 WP_021001360.1 sensor histidine kinase -
  SAIN_RS02070 (SAIN_0405) vraR 416369..417001 (+) 633 WP_021001361.1 response regulator transcription factor Regulator
  SAIN_RS02075 (SAIN_0406) - 417041..418441 (+) 1401 WP_021001362.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  SAIN_RS02080 (SAIN_0407) - 418443..418817 (+) 375 WP_021001363.1 S1 RNA-binding domain-containing protein -
  SAIN_RS02085 (SAIN_0408) - 418943..419260 (-) 318 WP_041784094.1 DUF960 domain-containing protein -
  SAIN_RS02090 (SAIN_0409) - 419380..419913 (-) 534 WP_003025799.1 DUF402 domain-containing protein -
  SAIN_RS02095 (SAIN_0410) recX 420000..420776 (-) 777 WP_003025796.1 recombination regulator RecX Regulator
  SAIN_RS02100 (SAIN_0411) - 420839..421615 (-) 777 WP_003025794.1 aminoglycoside 3'-phosphotransferase -
  SAIN_RS02105 (SAIN_0412) rlmD 421672..423030 (+) 1359 WP_021001366.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  SAIN_RS02110 (SAIN_0413) - 423101..423517 (+) 417 Protein_378 cytidine deaminase family protein -
  SAIN_RS02115 (SAIN_0414) - 423808..424740 (-) 933 WP_021001367.1 nitronate monooxygenase -
  SAIN_RS02120 (SAIN_0415) - 425053..425286 (+) 234 WP_003028395.1 DUF1858 domain-containing protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30309.85 Da        Isoelectric Point: 9.0671

>NTDB_id=50873 SAIN_RS02095 WP_003025796.1 420000..420776(-) (recX) [Streptococcus anginosus C1051]
MKITKIEKKKRLYLLELDETDKLYITEDTIVHFMLSKGMNISEQELKEIQDYAQFSYGKNLALYYLSFKQRTVKEVRDYL
TKHGISLDTIEKVLTILIKDNWIDDRQYAYSFIHSNLLSGDKGAFVLKQKLAQKGITAPIIDEELCKFDFTEVSQKVAQK
LLKKYQGKLPTKALHDKILQQLINKGFSYEEAKVAYQNLTIEDDDGNQQELLYKELDKQYRKYSKKYDGYDLKQRLTQAL
ARKGYDFSDIASALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=50873 SAIN_RS02095 WP_003025796.1 420000..420776(-) (recX) [Streptococcus anginosus C1051]
ATGAAAATCACTAAAATTGAAAAGAAAAAGCGTCTCTATCTTTTAGAATTGGACGAAACTGACAAACTTTACATCACTGA
AGATACCATCGTTCACTTTATGTTATCAAAAGGCATGAACATCAGTGAGCAAGAATTAAAAGAAATTCAGGACTACGCAC
AGTTTTCTTACGGAAAAAATCTAGCTCTATATTATCTTTCTTTCAAGCAAAGAACTGTCAAAGAAGTGCGGGATTATTTG
ACAAAACACGGGATTTCCTTAGATACCATCGAGAAAGTGCTAACGATTCTCATAAAAGATAACTGGATAGATGACAGACA
ATATGCTTATTCCTTTATTCATTCCAATCTTCTATCTGGTGATAAAGGTGCTTTTGTCCTCAAGCAAAAATTAGCTCAAA
AAGGTATCACAGCTCCTATTATTGATGAAGAATTATGCAAATTTGATTTTACAGAAGTAAGTCAAAAAGTTGCTCAGAAA
TTACTCAAAAAATATCAAGGGAAGCTCCCGACAAAAGCACTTCACGATAAAATCTTACAACAGCTCATCAATAAAGGTTT
TTCCTATGAAGAAGCAAAAGTGGCATACCAAAACCTCACGATAGAAGATGATGATGGAAACCAGCAAGAATTGCTTTACA
AAGAATTAGACAAACAATACCGCAAGTATTCTAAAAAATACGATGGCTATGATTTAAAACAACGGCTCACCCAAGCACTC
GCACGCAAAGGCTACGATTTTTCTGATATTGCTAGCGCTCTCAGAGAATATCTATAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.206

100

0.364

Multiple sequence alignment