Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   I5043_RS09775 Genome accession   NZ_CP065353
Coordinates   2013399..2014115 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain AR39_O1_merpol     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2008399..2019115
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5043_RS09745 (I5043_09745) - 2008647..2009273 (+) 627 WP_000522380.1 nitroreductase family protein -
  I5043_RS09750 (I5043_09750) - 2009602..2010387 (+) 786 WP_000867953.1 carbon-nitrogen family hydrolase -
  I5043_RS09755 (I5043_09755) hld 2010986..2011066 (-) 81 WP_000046023.1 delta-hemolysin -
  I5043_RS09760 (I5043_09760) agrB 2011357..2011926 (+) 570 WP_001105714.1 accessory gene regulator AgrB -
  I5043_RS09765 (I5043_09765) agrD 2011923..2012063 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  I5043_RS09770 (I5043_09770) agrC 2012088..2013380 (+) 1293 WP_031844950.1 quorum-sensing sensor histidine kinase AgrC -
  I5043_RS09775 (I5043_09775) agrA 2013399..2014115 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  I5043_RS09780 (I5043_09780) - 2014187..2014294 (+) 108 WP_041204320.1 hypothetical protein -
  I5043_RS09785 (I5043_09785) - 2014482..2015441 (-) 960 WP_001253306.1 carbohydrate kinase family protein -
  I5043_RS09790 (I5043_09790) - 2015438..2016922 (-) 1485 WP_196931758.1 sucrose-6-phosphate hydrolase -
  I5043_RS09795 (I5043_09795) - 2017071..2018021 (-) 951 WP_000790321.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=508721 I5043_RS09775 WP_000688492.1 2013399..2014115(+) (agrA) [Staphylococcus aureus strain AR39_O1_merpol]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=508721 I5043_RS09775 WP_000688492.1 2013399..2014115(+) (agrA) [Staphylococcus aureus strain AR39_O1_merpol]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCC
GTTGGTAACATTATATTTGTTACGAGTCACAGTGAACTTACCTATTTAACTTTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1