Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   KU537_RS02635 Genome accession   NZ_CP077859
Coordinates   561668..562291 (+) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain AC5     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 556668..567291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU537_RS02605 (KU537_02610) - 557641..558108 (-) 468 WP_000966142.1 CcdC family protein -
  KU537_RS02610 (KU537_02615) - 558202..558300 (-) 99 WP_001789897.1 hypothetical protein -
  KU537_RS02615 (KU537_02620) - 558287..558529 (-) 243 WP_000246909.1 YneF family protein -
  KU537_RS02620 (KU537_02625) recP/tkt 558807..560795 (-) 1989 WP_000481443.1 transketolase Machinery gene
  KU537_RS02625 (KU537_02630) - 560916..561155 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  KU537_RS02630 (KU537_02635) sosA 561292..561525 (-) 234 WP_078098370.1 DNA damage-induced cell division inhibitor SosA -
  KU537_RS02635 (KU537_02640) dinR/lexA 561668..562291 (+) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  KU537_RS02640 (KU537_02645) - 562671..563687 (-) 1017 WP_001797872.1 CAP domain-containing protein -
  KU537_RS02650 (KU537_02650) guaC 563709..564686 (-) 978 WP_000688122.1 GMP reductase -
  KU537_RS02655 (KU537_02655) rpsN 564843..565112 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  KU537_RS02660 (KU537_02660) rpmG 565566..565715 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=508681 KU537_RS02635 WP_001208755.1 561668..562291(+) (dinR/lexA) [Staphylococcus aureus strain AC5]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=508681 KU537_RS02635 WP_001208755.1 561668..562291(+) (dinR/lexA) [Staphylococcus aureus strain AC5]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCATCTTTCACGTCTTGAAGAAAAAG
GATATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCTGTAGAAAATATTGAAGAGTATTT
TCCATTACCTGAACACTTAACATCGACACATAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657