Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   I0292_RS24335 Genome accession   NZ_CP065335
Coordinates   4669200..4669394 (-) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain Y11     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4664200..4674394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I0292_RS24310 (I0292_24120) - 4664366..4665388 (-) 1023 WP_028412372.1 ABC transporter ATP-binding protein -
  I0292_RS24315 (I0292_24125) - 4665615..4666388 (-) 774 WP_016763040.1 DUF2268 domain-containing protein -
  I0292_RS24320 (I0292_24130) fabF 4666495..4667736 (-) 1242 WP_028412374.1 beta-ketoacyl-ACP synthase II -
  I0292_RS24325 (I0292_24135) - 4667776..4668714 (-) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  I0292_RS24330 (I0292_24140) - 4668971..4669171 (+) 201 WP_028412375.1 hypothetical protein -
  I0292_RS24335 (I0292_24145) comZ 4669200..4669394 (-) 195 WP_013081746.1 ComZ family protein Regulator
  I0292_RS24340 (I0292_24150) - 4669471..4670355 (-) 885 WP_028412376.1 NAD-dependent epimerase/dehydratase family protein -
  I0292_RS24345 (I0292_24155) - 4670537..4671277 (-) 741 WP_013055401.1 hypothetical protein -
  I0292_RS24350 (I0292_24160) - 4671487..4671675 (+) 189 WP_028412377.1 YjzD family protein -
  I0292_RS24355 (I0292_24165) - 4671879..4672763 (+) 885 WP_033578041.1 NAD(P)-dependent oxidoreductase -
  I0292_RS24360 (I0292_24170) galT 4672806..4674329 (-) 1524 WP_033578040.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=508561 I0292_RS24335 WP_013081746.1 4669200..4669394(-) (comZ) [Priestia megaterium strain Y11]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=508561 I0292_RS24335 WP_013081746.1 4669200..4669394(-) (comZ) [Priestia megaterium strain Y11]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATTTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTGACAAAAGTAATGAACGACGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563