Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | I0292_RS05770 | Genome accession | NZ_CP065335 |
| Coordinates | 1100156..1101208 (+) | Length | 350 a.a. |
| NCBI ID | WP_028411611.1 | Uniprot ID | - |
| Organism | Priestia megaterium strain Y11 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1095156..1106208
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I0292_RS05735 (I0292_05715) | - | 1095721..1095927 (+) | 207 | WP_028411617.1 | YqgQ family protein | - |
| I0292_RS05740 (I0292_05720) | - | 1095930..1096898 (+) | 969 | WP_098112947.1 | ROK family glucokinase | - |
| I0292_RS05745 (I0292_05725) | - | 1097010..1097912 (+) | 903 | WP_028411615.1 | M14 family metallocarboxypeptidase | - |
| I0292_RS05750 (I0292_05730) | - | 1097948..1098124 (-) | 177 | WP_028411614.1 | DUF2759 domain-containing protein | - |
| I0292_RS05755 (I0292_05735) | - | 1098334..1098966 (+) | 633 | WP_028411613.1 | MBL fold metallo-hydrolase | - |
| I0292_RS05760 (I0292_05740) | - | 1099004..1099240 (-) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| I0292_RS05765 (I0292_05745) | - | 1099502..1099885 (+) | 384 | WP_028411612.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| I0292_RS05770 (I0292_05750) | comGA | 1100156..1101208 (+) | 1053 | WP_028411611.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| I0292_RS05775 (I0292_05755) | comGB | 1101199..1102245 (+) | 1047 | WP_033579696.1 | competence type IV pilus assembly protein ComGB | - |
| I0292_RS05780 (I0292_05760) | comGC | 1102260..1102571 (+) | 312 | WP_016765560.1 | competence type IV pilus major pilin ComGC | - |
| I0292_RS05785 (I0292_05765) | comGD | 1102558..1102995 (+) | 438 | WP_016765559.1 | competence type IV pilus minor pilin ComGD | - |
| I0292_RS05790 (I0292_05770) | - | 1102979..1103317 (+) | 339 | WP_098112946.1 | type II secretion system protein | - |
| I0292_RS05795 (I0292_05775) | comGF | 1103314..1103751 (+) | 438 | WP_099331286.1 | competence type IV pilus minor pilin ComGF | - |
| I0292_RS05800 (I0292_05780) | comGG | 1103741..1104115 (+) | 375 | WP_098112944.1 | competence type IV pilus minor pilin ComGG | - |
| I0292_RS05805 (I0292_05785) | - | 1104159..1104344 (+) | 186 | WP_013059170.1 | YqzE family protein | - |
| I0292_RS05810 (I0292_05790) | - | 1104367..1105191 (-) | 825 | WP_099331285.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39596.97 Da Isoelectric Point: 9.0586
>NTDB_id=508533 I0292_RS05770 WP_028411611.1 1100156..1101208(+) (comGA) [Priestia megaterium strain Y11]
MTEIEQFATYVIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSVDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYVIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSVDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=508533 I0292_RS05770 WP_028411611.1 1100156..1101208(+) (comGA) [Priestia megaterium strain Y11]
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATGTGAGTGTCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGGGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCGTTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACCTCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTGCA
GGTAAATGAACGCGCAGGGATTACGTATACGACTGGTTTAAAAGCTATATTGCGCCATGATCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACCGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAGTTTGGCGTTAGCTTTCAAGAAATGGAGCAGACTCTTGTAGC
AGTAGCTGCACAGCGTCTTGTAGAAATTCGCTGTCCGCTGTGTTCGGGAAAATGCCACCCTGCTTGTAAAAAAATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATGTGAGTGTCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGGGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCGTTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACCTCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTGCA
GGTAAATGAACGCGCAGGGATTACGTATACGACTGGTTTAAAAGCTATATTGCGCCATGATCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACCGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAGTTTGGCGTTAGCTTTCAAGAAATGGAGCAGACTCTTGTAGC
AGTAGCTGCACAGCGTCTTGTAGAAATTCGCTGTCCGCTGTGTTCGGGAAAATGCCACCCTGCTTGTAAAAAAATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.571 |
100 |
0.586 |