Detailed information NTG0508223

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: I3X05_RS21645
• Genome accession: NZ_CP065218
• Coordinates: 1101382..1102479 (+)
• Length: 365 a.a.
• NCBI ID: WP_045569518.1
• Uniprot ID: A0A0F2IKI6
• Organism: Vibrio navarrensis strain 20-VB00237
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1096382..1107479

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I3X05_RS21615 (I3X05_21970)	-	1096570..1097910 (-)	1341	WP_045569523.1	MATE family efflux transporter	-
I3X05_RS21620 (I3X05_21975)	-	1098078..1098395 (-)	318	WP_045569522.1	DUF496 family protein	-
I3X05_RS21625 (I3X05_21980)	-	1098668..1098871 (+)	204	WP_039445163.1	hypothetical protein	-
I3X05_RS21630 (I3X05_21985)	-	1098971..1099630 (+)	660	WP_045569521.1	YceH family protein	-
I3X05_RS21635 (I3X05_21990)	-	1099630..1099926 (+)	297	WP_045569520.1	GIY-YIG nuclease family protein	-
I3X05_RS21640 (I3X05_21995)	traF	1099999..1101159 (+)	1161	WP_045569519.1	conjugal transfer protein TraF	-
I3X05_RS21645 (I3X05_22000)	luxP	1101382..1102479 (+)	1098	WP_045569518.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
I3X05_RS21650 (I3X05_22005)	luxQ	1102483..1105050 (+)	2568	WP_045569517.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
I3X05_RS21655 (I3X05_22010)	-	1105085..1105747 (-)	663	WP_045569516.1	flagellar brake protein	-
I3X05_RS21660 (I3X05_22015)	-	1105887..1106825 (-)	939	WP_045569546.1	DMT family transporter	-
I3X05_RS21665 (I3X05_22020)	-	1106966..1107421 (+)	456	WP_045569515.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41369.95 Da
• Isoelectric Point: 6.0670

>NTDB_id=508223 I3X05_RS21645 WP_045569518.1 1101382..1102479(+) (luxP) [Vibrio navarrensis strain 20-VB00237]
MKKALMMSLLCIANFSANAQTAEVLNGYWAYQEYLERFPEQADLTNALAQTVRNHPVPLKAYQAKPVRISVVFPGQQVSD
YWVRNLSAFEKRMDKLQISYQINQVFTRPNADVKQQSVSLMEALKSKSDYLIFTLDTTRHRKFIEHVLDSSDTKLILQNI
TTPVQAWEKRQPFLYVGFDHAQGSIALAKQLEKMYPQGGKYSVLYFSEGYVSDARGDTFIRELNRDNRFQLRSSFYTKAT
KDSGYETAMMSLEKYPDVNFIYACSTDVALGALDALKELKRDDIVLNGWGGGSAELDAISAGDLDLTVMRMNDDTGIAMA
EAIKWDLEGKNVPTVFSGDFEVVTKQDSPQHIEALKERAFRYSGQ

Nucleotide

• Length: 1098 bp

>NTDB_id=508223 I3X05_RS21645 WP_045569518.1 1101382..1102479(+) (luxP) [Vibrio navarrensis strain 20-VB00237]
ATGAAAAAAGCATTAATGATGTCTTTGCTTTGTATAGCAAATTTTAGTGCCAATGCACAAACTGCAGAAGTATTGAACGG
ATATTGGGCGTATCAAGAATATTTAGAGCGTTTCCCAGAACAAGCCGATTTAACCAATGCGCTTGCGCAAACAGTGCGTA
ACCATCCTGTGCCGCTGAAAGCGTATCAAGCCAAACCAGTGCGTATTTCTGTGGTGTTTCCCGGGCAACAAGTGTCTGAT
TACTGGGTTAGGAATCTGAGTGCGTTTGAGAAACGCATGGATAAGCTGCAGATAAGCTATCAGATCAACCAAGTGTTCAC
CCGCCCAAATGCCGATGTTAAGCAGCAAAGCGTCTCTTTGATGGAGGCGCTGAAGAGTAAGTCGGATTATCTGATTTTTA
CCTTGGATACCACCCGTCACCGCAAATTCATTGAGCATGTTCTTGACTCCTCGGACACTAAGCTGATCTTGCAAAACATC
ACCACGCCAGTACAGGCATGGGAAAAACGCCAACCATTTTTGTATGTCGGTTTCGACCATGCGCAAGGTAGTATTGCGCT
GGCTAAGCAATTGGAAAAAATGTACCCACAGGGCGGCAAGTACTCTGTGCTCTATTTCTCAGAAGGCTATGTTAGTGACG
CCAGAGGCGATACCTTTATTCGTGAGCTAAACAGGGACAACCGTTTTCAATTGCGCTCGTCGTTCTACACTAAAGCGACC
AAAGACTCTGGTTATGAAACCGCGATGATGAGCTTAGAAAAATACCCAGATGTCAACTTCATCTATGCCTGCTCGACCGA
TGTCGCCTTAGGCGCACTAGATGCGTTAAAAGAGCTTAAACGAGACGATATTGTGCTCAACGGCTGGGGCGGTGGATCCG
CTGAATTGGACGCCATCAGCGCGGGTGATCTCGATCTCACCGTCATGCGGATGAATGATGATACGGGCATAGCGATGGCA
GAAGCGATTAAGTGGGATTTGGAAGGGAAGAACGTCCCGACGGTATTTTCAGGAGATTTTGAAGTGGTGACCAAACAAGA
CAGCCCGCAGCACATCGAAGCGCTTAAAGAGAGAGCCTTCAGATATTCTGGCCAATAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (70-324)

3D structure

• AlphaFold DB: A0A0F2IKI6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	65.289	99.452	0.649