Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   I3X02_RS15910 Genome accession   NZ_CP065213
Coordinates   3127573..3128523 (-) Length   316 a.a.
NCBI ID   WP_209367012.1    Uniprot ID   -
Organism   Priestia megaterium strain HGS7     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3122573..3133523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I3X02_RS15880 - 3122648..3123727 (+) 1080 WP_116738857.1 PrsW family intramembrane metalloprotease -
  I3X02_RS15885 - 3124196..3124336 (-) 141 WP_014459290.1 hypothetical protein -
  I3X02_RS15890 - 3124592..3124858 (-) 267 Protein_3070 manganese catalase family protein -
  I3X02_RS15895 - 3124901..3125857 (-) 957 WP_115654342.1 siderophore ABC transporter substrate-binding protein -
  I3X02_RS15900 - 3125881..3126639 (-) 759 WP_115654343.1 ABC transporter ATP-binding protein -
  I3X02_RS15905 - 3126633..3127580 (-) 948 WP_209367010.1 iron chelate uptake ABC transporter family permease subunit -
  I3X02_RS15910 ceuB 3127573..3128523 (-) 951 WP_209367012.1 ABC transporter permease Machinery gene
  I3X02_RS15915 - 3129091..3129897 (-) 807 WP_013057892.1 cell wall hydrolase -
  I3X02_RS15920 - 3130260..3130514 (+) 255 WP_013057893.1 hypothetical protein -
  I3X02_RS15925 - 3130596..3130760 (-) 165 WP_181903737.1 hypothetical protein -
  I3X02_RS15930 - 3131251..3131436 (-) 186 WP_014459286.1 hypothetical protein -
  I3X02_RS15935 - 3132000..3132563 (-) 564 WP_014459283.1 NAD(P)H-dependent oxidoreductase -
  I3X02_RS15940 lepB 3132797..3133357 (-) 561 WP_060745332.1 signal peptidase I -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34993.27 Da        Isoelectric Point: 9.9188

>NTDB_id=508146 I3X02_RS15910 WP_209367012.1 3127573..3128523(-) (ceuB) [Priestia megaterium strain HGS7]
MKFYQLILVFAVLAVLSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIVAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDLLGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=508146 I3X02_RS15910 WP_209367012.1 3127573..3128523(-) (ceuB) [Priestia megaterium strain HGS7]
TTGAAGTTTTATCAGTTAATTCTTGTATTTGCTGTACTAGCGGTTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGCATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACAATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCGTTCATTTTCTCACTGGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGTAGTATCGTAAGTTCCTTAGCTACCTTCATTGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGATTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAGTCGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGTG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTCTTAGGATTAATCATTCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGCAAAAGCCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTTGCGTGCGATCTTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGTTAATGGTAGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.815

95.886

0.497