Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   I3X02_RS03545 Genome accession   NZ_CP065213
Coordinates   671002..671196 (+) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain HGS7     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 666002..676196
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I3X02_RS03520 galT 666065..667588 (+) 1524 WP_014461598.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  I3X02_RS03525 - 667631..668515 (-) 885 WP_014461597.1 NAD(P)-dependent oxidoreductase -
  I3X02_RS03530 - 668719..668907 (-) 189 WP_013055400.1 YjzD family protein -
  I3X02_RS03535 - 669117..669857 (+) 741 WP_013055401.1 hypothetical protein -
  I3X02_RS03540 - 670040..670924 (+) 885 WP_209368250.1 NAD(P)-dependent oxidoreductase -
  I3X02_RS03545 comZ 671002..671196 (+) 195 WP_013081746.1 ComZ family protein Regulator
  I3X02_RS03550 - 671225..671425 (-) 201 WP_209368252.1 hypothetical protein -
  I3X02_RS03555 - 671682..672620 (+) 939 WP_028407464.1 beta-ketoacyl-ACP synthase III -
  I3X02_RS03560 fabF 672660..673901 (+) 1242 WP_115653062.1 beta-ketoacyl-ACP synthase II -
  I3X02_RS03565 - 674008..674781 (+) 774 WP_140451662.1 DUF2268 domain-containing putative Zn-dependent protease -
  I3X02_RS03570 - 675008..676030 (+) 1023 WP_208732735.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=508131 I3X02_RS03545 WP_013081746.1 671002..671196(+) (comZ) [Priestia megaterium strain HGS7]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=508131 I3X02_RS03545 WP_013081746.1 671002..671196(+) (comZ) [Priestia megaterium strain HGS7]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACCTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGACGCTTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563