Detailed information NTG0508013

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ITG08_RS04675
• Genome accession: NZ_CP065206
• Coordinates: 1002951..1003955 (+)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain ED653
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 997951..1008955

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ITG08_RS04660 (ITG08_04650)	-	998338..999627 (-)	1290	WP_016783694.1	malic enzyme-like NAD(P)-binding protein	-
ITG08_RS04665 (ITG08_04655)	rpmE	999959..1000177 (-)	219	WP_004737142.1	50S ribosomal protein L31	-
ITG08_RS04670 (ITG08_04660)	priA	1000509..1002710 (+)	2202	WP_050612616.1	primosomal protein N'	-
ITG08_RS04675 (ITG08_04665)	cytR	1002951..1003955 (+)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
ITG08_RS04680 (ITG08_04670)	-	1004078..1004617 (+)	540	WP_010435351.1	SPOR domain-containing protein	-
ITG08_RS04685 (ITG08_04675)	hslV	1004824..1005372 (+)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
ITG08_RS04690 (ITG08_04680)	hslU	1005431..1006771 (+)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
ITG08_RS04695 (ITG08_04685)	-	1006927..1007844 (+)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ITG08_RS04700 (ITG08_04690)	rraA	1007918..1008436 (+)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
ITG08_RS04705 (ITG08_04695)	zapB	1008543..1008785 (-)	243	WP_010435362.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=508013 ITG08_RS04675 WP_010435348.1 1002951..1003955(+) (cytR) [Vibrio cyclitrophicus strain ED653]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=508013 ITG08_RS04675 WP_010435348.1 1002951..1003955(+) (cytR) [Vibrio cyclitrophicus strain ED653]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACATATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGTTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874