Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   KU039_RS17850 Genome accession   NZ_CP077843
Coordinates   3711358..3711993 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain DETAB-E155     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3706358..3716993
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU039_RS17830 (KU039_17750) - 3706436..3707251 (+) 816 WP_000011159.1 DsbC family protein -
  KU039_RS17835 (KU039_17755) - 3707496..3708797 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  KU039_RS17840 (KU039_17760) thrC 3708853..3709992 (+) 1140 WP_000063593.1 threonine synthase -
  KU039_RS17845 (KU039_17765) pbpG 3710099..3711145 (-) 1047 WP_003384760.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  KU039_RS17850 (KU039_17770) letA 3711358..3711993 (+) 636 WP_000633799.1 response regulator Regulator
  KU039_RS17855 (KU039_17775) pilS 3712004..3713572 (+) 1569 WP_001160333.1 PAS domain-containing sensor histidine kinase Regulator
  KU039_RS17860 (KU039_17780) - 3713597..3715018 (+) 1422 WP_000840549.1 sigma-54 dependent transcriptional regulator -
  KU039_RS17865 (KU039_17785) - 3715022..3716206 (-) 1185 WP_000942504.1 S41 family peptidase -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=507939 KU039_RS17850 WP_000633799.1 3711358..3711993(+) (letA) [Acinetobacter baumannii strain DETAB-E155]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=507939 KU039_RS17850 WP_000633799.1 3711358..3711993(+) (letA) [Acinetobacter baumannii strain DETAB-E155]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCAGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAACCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55