Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   SMULJ23_RS09810 Genome accession   NC_017768
Coordinates   2014845..2015618 (+) Length   257 a.a.
NCBI ID   WP_019314269.1    Uniprot ID   -
Organism   Streptococcus mutans LJ23     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2009845..2020618
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMULJ23_RS09795 (SMULJ23_1918) - 2011472..2012134 (-) 663 WP_014678317.1 YoaK family protein -
  SMULJ23_RS09800 (SMULJ23_1919) rlmH 2012477..2012956 (-) 480 WP_002262651.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SMULJ23_RS09805 (SMULJ23_1920) htrA 2013162..2014370 (+) 1209 WP_002262650.1 trypsin-like peptidase domain-containing protein Regulator
  SMULJ23_RS09810 (SMULJ23_1921) spo0J 2014845..2015618 (+) 774 WP_019314269.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 257 a.a.        Molecular weight: 29638.32 Da        Isoelectric Point: 10.0178

>NTDB_id=50791 SMULJ23_RS09810 WP_019314269.1 2014845..2015618(+) (spo0J) [Streptococcus mutans LJ23]
MMTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVII
KKISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQ
GHARLLLSIEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKEPSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLK
ISFSSEEDFNRLMNKLN

Nucleotide


Download         Length: 774 bp        

>NTDB_id=50791 SMULJ23_RS09810 WP_019314269.1 2014845..2015618(+) (spo0J) [Streptococcus mutans LJ23]
ATGATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAAC
TAAAGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGCTTAATTCAACCCATTATTGTTCGAAAATCTGATATTT
TTGGCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATC
AAAAAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGA
AGCCAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGAC
CATATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTGCACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAA
GGACACGCACGACTTCTTTTAAGTATAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTT
AAGTGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAGAACCTTCAAAAGACATTTTTCTGGCAG
AAAAAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAA
ATTTCTTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAAACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

99.222

100

0.992


Multiple sequence alignment