Detailed information NTG0507829

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: I2439_RS05820
• Genome accession: NZ_CP065191
• Coordinates: 1216432..1217661 (-)
• Length: 409 a.a.
• NCBI ID: WP_111710590.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ46
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1211432..1222661

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I2439_RS05805 (HIEAAJJG_01175)	-	1212447..1215449 (-)	3003	WP_196819630.1	leucine-rich repeat domain-containing protein	-
I2439_RS05810 (HIEAAJJG_01176)	-	1215535..1215780 (-)	246	WP_111692487.1	hypothetical protein	-
I2439_RS05815 (HIEAAJJG_01177)	yihA	1215823..1216422 (-)	600	WP_196820103.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
I2439_RS05820 (HIEAAJJG_01178)	clpX	1216432..1217661 (-)	1230	WP_111710590.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
I2439_RS05825 (HIEAAJJG_01179)	-	1217697..1217867 (-)	171	WP_012515696.1	hypothetical protein	-
I2439_RS05830 (HIEAAJJG_01180)	-	1217887..1218384 (-)	498	WP_196819631.1	dihydrofolate reductase	-
I2439_RS05835 (HIEAAJJG_01181)	-	1218465..1219304 (-)	840	WP_196819632.1	thymidylate synthase	-
I2439_RS05840 (HIEAAJJG_01182)	-	1219489..1220664 (+)	1176	WP_196819633.1	hydroxymethylglutaryl-CoA synthase	-
I2439_RS05845 (HIEAAJJG_01183)	-	1220651..1221934 (+)	1284	WP_196820104.1	hydroxymethylglutaryl-CoA reductase, degradative	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45171.69 Da
• Isoelectric Point: 4.5726

>NTDB_id=507829 I2439_RS05820 WP_111710590.1 1216432..1217661(-) (clpX) [Streptococcus equi subsp. zooepidemicus strain SEZ46]
MAGNRSNDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLEILNQYVIGQER
AKRALSVAVYNHYKRISFTESRDDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDDNASYMQEIIAEDIQKFGLIPEFIGRLPVVAALEQLNTEDLIRI
LTEPRNALVKQYQALLSYDGVELEFEKGALEAIAGRAIERKTGARGLRSIIEETMLDIMFEVPSQEEVTKVRITKEAVEG
QSKPVLEIA

Nucleotide

• Length: 1230 bp

>NTDB_id=507829 I2439_RS05820 WP_111710590.1 1216432..1217661(-) (clpX) [Streptococcus equi subsp. zooepidemicus strain SEZ46]
ATGGCAGGAAATCGTAGTAACGATATTAAGGTTCATTGCTCGTTTTGCGGCAAGAGCCAAGACGAAGTGAAAAAAATTAT
TGCAGGCAATAACGTCTTTATTTGTAACGAATGTGTTGCCTTATCACAAGAAATCATCAAGGAAGAATTGGCAGAAGAGG
TTCTCGCTGATCTGACTGAGGTACCAAAGCCAAAAGAGCTGCTTGAGATTTTAAATCAATACGTCATTGGGCAGGAGCGT
GCTAAGAGAGCCTTATCAGTTGCAGTTTACAACCACTACAAGAGGATTTCATTTACTGAGAGTCGTGACGATGATGATGT
GGATTTGCAGAAGTCCAATATTCTGATGATTGGACCAACAGGCTCAGGAAAGACCTTTTTGGCACAGACCCTAGCTAAGA
GTCTGAATGTTCCGTTTGCTATTGCTGATGCAACCTCTTTGACTGAGGCAGGCTATGTCGGAGAAGATGTGGAAAATATC
CTCCTGAAATTAATTCAAGCAGCTGATTACAATGTTGAACGTGCAGAGCGTGGCATTATTTATGTTGATGAAATTGATAA
AATCGCTAAAAAAGGTGAGAATGTCTCTATCACTCGTGATGTATCAGGAGAGGGTGTCCAACAAGCCTTGCTAAAAATTA
TTGAGGGAACGGTTGCTAGTGTTCCACCGCAAGGTGGTCGTAAGCACCCAAACCAAGAGATGATACAGATTGATACCAAA
AATATCTTGTTTATCGTCGGAGGCGCCTTTGATGGTATCGAAGAAATTGTCAAGCAGCGCTTGGGAGAAAAGATCATTGG
TTTTGGGCAAAATAGTCGAAAGATTGATGACAATGCTTCCTATATGCAGGAGATCATTGCTGAGGATATTCAAAAATTTG
GTCTGATTCCCGAATTTATTGGACGCTTGCCTGTTGTAGCAGCGCTTGAGCAGCTTAATACCGAGGATTTGATTCGTATT
TTAACAGAGCCTAGAAATGCTCTTGTGAAGCAATATCAAGCCTTATTGTCATATGATGGCGTAGAGCTTGAGTTTGAAAA
GGGTGCTCTGGAGGCTATTGCAGGCAGGGCTATTGAGCGCAAGACTGGTGCGCGTGGTCTGAGGTCTATTATCGAAGAAA
CCATGCTGGATATCATGTTTGAGGTGCCAAGCCAAGAGGAAGTAACCAAGGTACGCATTACTAAGGAAGCTGTCGAGGGT
CAATCAAAGCCCGTTTTAGAGATAGCCTAG

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	88.753	100	0.888
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.102	98.044	0.579