Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I2438_RS10505 Genome accession   NZ_CP065190
Coordinates   2139962..2140735 (+) Length   257 a.a.
NCBI ID   WP_021321253.1    Uniprot ID   A0AAW3GJV3
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ36     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2134962..2145735
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2438_RS10495 (HCFMJIKG_02085) rlmH 2137930..2138409 (-) 480 WP_012516519.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I2438_RS10500 (HCFMJIKG_02086) htrA 2138619..2139842 (+) 1224 WP_012516520.1 S1C family serine protease Regulator
  I2438_RS10505 (HCFMJIKG_02087) spo0J 2139962..2140735 (+) 774 WP_021321253.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29134.72 Da        Isoelectric Point: 9.6561

>NTDB_id=507798 I2438_RS10505 WP_021321253.1 2139962..2140735(+) (spo0J) [Streptococcus equi subsp. zooepidemicus strain SEZ36]
MTEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGERRFKAAKLAGLQKIPAIVK
EISTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHEDIATYMGKSRPYISNTIRLLQLPDVIRQAIEDGTISAG
HARALLSLSTSKEQELYFHNILDQGLSVRQIEQLVKTKHPPQKRNKHKTIFVKSLEKELSKSLGLPVALSLQKNDSGQLQ
LSFSNQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=507798 I2438_RS10505 WP_021321253.1 2139962..2140735(+) (spo0J) [Streptococcus equi subsp. zooepidemicus strain SEZ36]
ATGACAGAAATCCTAATGCACATTCCTATCGAGGATATTGTGGCAAATCCTTATCAACCACGTCTTCAATTTAATCAAAA
AGAGCTTGAAGAGCTGGCACATTCCATTCAGGCTAATGGTTTGATTCAACCAATCATTGTCAGAAAATCTGATGTATTTG
GCTATGAATTAGTCGCTGGAGAACGACGCTTTAAAGCAGCCAAGCTGGCAGGACTTCAAAAGATTCCAGCAATTGTTAAG
GAAATCTCTACTCTTGAGAGCATGCAGCAGGCCATCGTAGAAAACCTACAGCGCTCAAATTTAAATGCTATTGAAGAGGC
TAAGGCCTATCAATTACTTATTGATAAAAATAAGATGACCCATGAGGACATCGCGACATACATGGGAAAATCACGCCCTT
ATATCAGCAACACCATCAGACTGCTGCAATTACCAGACGTTATTAGACAAGCGATTGAGGACGGTACCATTAGCGCCGGC
CATGCAAGAGCTTTATTATCCTTGTCAACATCAAAAGAGCAGGAGCTGTATTTTCACAACATTCTGGATCAAGGCTTAAG
CGTTAGGCAAATCGAACAGCTGGTAAAGACTAAGCATCCCCCCCAAAAAAGAAACAAACATAAAACCATTTTTGTGAAGT
CTTTAGAAAAAGAGCTCTCAAAATCATTAGGATTACCTGTGGCATTGTCTCTCCAAAAAAATGACAGTGGGCAGCTGCAA
CTGTCATTTTCAAACCAAGAAGAATTGAACAGAATTATCAACAAGCTGCTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(148-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

62.109

99.611

0.619