Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   I2438_RS02550 Genome accession   NZ_CP065190
Coordinates   487251..487976 (+) Length   241 a.a.
NCBI ID   WP_021320421.1    Uniprot ID   A0AAW3GP69
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ36     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 482251..492976
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2438_RS02520 (HCFMJIKG_00494) tsaE 482858..483301 (+) 444 WP_021320420.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  I2438_RS02525 (HCFMJIKG_00495) - 483294..483821 (+) 528 WP_014622377.1 GNAT family N-acetyltransferase -
  I2438_RS02530 (HCFMJIKG_00496) brpA 483822..485084 (+) 1263 WP_165625996.1 biofilm formation/cell division transcriptional regulator BrpA -
  I2438_RS02535 (HCFMJIKG_00497) - 485254..485550 (-) 297 WP_231146362.1 chemotaxis protein -
  I2438_RS02540 (HCFMJIKG_00498) - 485547..485966 (-) 420 WP_012515079.1 HIT family protein -
  I2438_RS02545 (HCFMJIKG_00499) - 486418..486714 (-) 297 WP_012515080.1 hypothetical protein -
  I2438_RS02550 (HCFMJIKG_00500) pptA 487251..487976 (+) 726 WP_021320421.1 ABC transporter ATP-binding protein Regulator
  I2438_RS02555 (HCFMJIKG_00501) - 487980..489014 (+) 1035 WP_021320422.1 ABC transporter permease -
  I2438_RS02560 (HCFMJIKG_00502) ccrZ 489077..489868 (+) 792 WP_012515084.1 cell cycle regulator CcrZ -
  I2438_RS02565 (HCFMJIKG_00503) trmB 489868..490503 (+) 636 WP_231146361.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I2438_RS02575 (HCFMJIKG_00505) - 490696..491775 (-) 1080 WP_015986699.1 tyrosine-type recombinase/integrase -
  I2438_RS02580 (HCFMJIKG_00506) - 491894..492445 (-) 552 WP_015986700.1 hypothetical protein -
  I2438_RS02585 (HCFMJIKG_00507) - 492456..492839 (-) 384 WP_015986701.1 ImmA/IrrE family metallo-endopeptidase -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26506.80 Da        Isoelectric Point: 4.8615

>NTDB_id=507753 I2438_RS02550 WP_021320421.1 487251..487976(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain SEZ36]
MLNIENVTGGYLNIPVLKDISFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLGEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDLELAHKRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAIADLIKALEVEKAKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=507753 I2438_RS02550 WP_021320421.1 487251..487976(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain SEZ36]
ATGTTAAACATTGAGAATGTCACTGGAGGCTACCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTTGGAAATGG
AGAGCTAGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCAT
ATAAAGGAAGGATTTCCATTGATGGTTTAACCTTGGGAGAGCATGAAGCTGATTATCGTAAGAAAATTGGCTTTATTCCA
GAAACACCAAGCTTATATGAGGAGCTGACCTTAGCAGAGCATATCAATACGGTGGCTATGGCCTATGATATTGATTTGGA
GCTGGCACATAAGCGAGCTGAGCCCTTCTTAGAGCTGTTTCGTTTGACGGATAAGCTGGATTGGTTTCCGGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGCGCTTTTGTCATTGACCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGGCTCGACCCCTTAGCAATTGCTGATTTGATTAAGGCTTTAGAGGTTGAAAAGGCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGTTTTGTGATATTGCATCAGGGGCAGGTGCGTGCGCAAG
GGACTCTGGCGGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACCTAGCGCTGACAAAAGAG
GGGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.059

99.17

0.734
  pptA Streptococcus thermophilus LMD-9

73.222

99.17

0.726