Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   SANR_RS08610 Genome accession   NC_022239
Coordinates   1757074..1757532 (-) Length   152 a.a.
NCBI ID   WP_003035559.1    Uniprot ID   I0SFL8
Organism   Streptococcus anginosus C238     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1752074..1762532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS08590 (SANR_1667) - 1752714..1753034 (-) 321 WP_003035457.1 PTS cellobiose transporter subunit IIA -
  SANR_RS08595 (SANR_1668) - 1753045..1753359 (-) 315 WP_020999794.1 PTS cellobiose transporter subunit IIB -
  SANR_RS08600 (SANR_1669) rcrQ 1753569..1755329 (-) 1761 WP_003035495.1 ABC transporter ATP-binding protein Regulator
  SANR_RS08605 (SANR_1670) - 1755319..1757081 (-) 1763 Protein_1690 ABC transporter ATP-binding protein -
  SANR_RS08610 (SANR_1671) rcrR 1757074..1757532 (-) 459 WP_003035559.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  SANR_RS08615 (SANR_1672) - 1757688..1758098 (-) 411 WP_003035443.1 peptide deformylase -
  SANR_RS08620 (SANR_1673) scrK 1758166..1759065 (-) 900 WP_020999796.1 fructokinase ScrK -
  SANR_RS08625 (SANR_1674) - 1759341..1761239 (-) 1899 WP_003026168.1 sucrose-specific PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17877.88 Da        Isoelectric Point: 7.8790

>NTDB_id=50767 SANR_RS08610 WP_003035559.1 1757074..1757532(-) (rcrR) [Streptococcus anginosus C238]
MEKPLLEFKRFGRKTHLMIQKIAKERGIEFMAGPQGQVLHFVNHREDCDKMTFIKDIEQELGITKSVASNLMKRMVKNGL
IYLEVSEADKRAKIIRLTPESKERMNKIRDFFDEMDRCLLTDISEEDLVTFFQVMGKFYQNIEKLEKGEANV

Nucleotide


Download         Length: 459 bp        

>NTDB_id=50767 SANR_RS08610 WP_003035559.1 1757074..1757532(-) (rcrR) [Streptococcus anginosus C238]
ATGGAAAAACCATTATTAGAATTCAAGCGATTTGGACGGAAGACACATCTGATGATTCAAAAAATTGCCAAAGAGCGAGG
GATTGAATTTATGGCGGGTCCACAAGGGCAAGTATTGCATTTTGTGAATCACCGCGAAGACTGTGATAAGATGACCTTTA
TTAAAGATATTGAGCAGGAGTTGGGCATTACTAAGTCCGTTGCCAGTAATTTAATGAAGCGAATGGTGAAGAATGGCTTG
ATTTATCTGGAAGTGAGTGAAGCAGATAAACGCGCTAAGATTATTCGTTTAACGCCGGAATCAAAAGAGCGCATGAATAA
AATTCGTGATTTTTTTGATGAAATGGATCGTTGCCTATTGACAGATATTTCAGAAGAAGATTTGGTTACTTTTTTTCAAG
TGATGGGGAAATTTTACCAGAATATTGAAAAATTAGAAAAAGGAGAAGCGAATGTTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SFL8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

43.836

96.053

0.421