Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   SANR_RS07830 Genome accession   NC_022239
Coordinates   1613483..1614436 (+) Length   317 a.a.
NCBI ID   WP_003035980.1    Uniprot ID   I0SDZ1
Organism   Streptococcus anginosus C238     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1608483..1619436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS07810 (SANR_1513) - 1610557..1611249 (-) 693 WP_003036126.1 phosphoglycerate mutase -
  SANR_RS07815 (SANR_1514) - 1611387..1611848 (-) 462 WP_003035860.1 Fur family transcriptional regulator -
  SANR_RS07820 (SANR_1515) - 1612016..1612291 (-) 276 WP_003036014.1 HU family DNA-binding protein -
  SANR_RS07825 (SANR_1516) - 1612420..1613253 (-) 834 WP_006269763.1 DegV family protein -
  SANR_RS07830 (SANR_1517) ceuB 1613483..1614436 (+) 954 WP_003035980.1 ABC transporter permease Machinery gene
  SANR_RS07835 (SANR_1518) - 1614429..1615391 (+) 963 WP_003036017.1 iron chelate uptake ABC transporter family permease subunit -
  SANR_RS07840 (SANR_1519) - 1615393..1616145 (+) 753 WP_003036288.1 ABC transporter ATP-binding protein -
  SANR_RS07845 (SANR_1520) - 1616168..1617142 (+) 975 WP_003036100.1 siderophore ABC transporter substrate-binding protein -
  SANR_RS07850 (SANR_1521) - 1617205..1617936 (-) 732 WP_003036167.1 metallophosphoesterase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35234.05 Da        Isoelectric Point: 9.7516

>NTDB_id=50760 SANR_RS07830 WP_003035980.1 1613483..1614436(+) (ceuB) [Streptococcus anginosus C238]
MKQTKFLGILCLALVMISITVGSSHFSWWQLLHGDKQTGLLFWESRLPRTISILLAGSSMSIAGLLMQTVTQNHFAAPST
VGTVEAAKFGMLLSLFFFPSATLAQKMLFAFVSAIFFTIIFIRFIRKFSFKEKWLLPLVGIVYSGVISAAGEIIAYRFEL
VQSMTSWTQGSFSMIQKHQYEWLFLSLIILIAVWKLSATFTIMNLGEDASHNLGISFYQMEGMTLFLIALTTSVTMITVG
SLPFIGVIVPNIIRKFYGDHITRIKGLTALTGSCLILVCDIVARLVIRPYEVSVSLILGILGSLAFVYLLWQGAAHE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=50760 SANR_RS07830 WP_003035980.1 1613483..1614436(+) (ceuB) [Streptococcus anginosus C238]
ATGAAACAGACAAAATTTTTAGGAATTCTTTGTCTCGCTCTGGTTATGATTTCAATTACAGTTGGTTCTAGTCACTTTTC
GTGGTGGCAGCTGCTACATGGAGATAAGCAGACCGGGCTGCTATTTTGGGAGTCACGCTTGCCAAGGACAATTAGCATTC
TCCTAGCGGGCTCTAGCATGAGCATTGCCGGGCTTCTTATGCAGACTGTTACACAAAATCATTTTGCTGCTCCTAGTACA
GTTGGAACGGTCGAGGCTGCGAAATTTGGTATGTTGCTTAGTTTATTTTTCTTTCCGTCAGCCACATTAGCGCAAAAAAT
GCTATTTGCTTTTGTATCTGCTATTTTTTTTACGATTATTTTTATTAGATTTATCAGAAAATTCTCATTTAAAGAAAAAT
GGTTGTTACCACTTGTCGGGATTGTTTACAGTGGAGTGATTAGTGCAGCAGGAGAAATCATTGCCTATCGTTTTGAGCTT
GTCCAAAGCATGACTTCATGGACACAAGGCTCTTTTTCCATGATTCAGAAACATCAATATGAATGGTTATTTTTAAGTTT
GATTATCTTGATTGCAGTATGGAAGCTATCAGCCACGTTTACCATTATGAATCTAGGGGAAGACGCTAGTCATAATCTAG
GCATTTCCTTTTACCAAATGGAGGGAATGACGTTGTTTCTCATTGCATTGACGACAAGTGTGACGATGATTACAGTCGGC
TCTCTTCCATTTATCGGAGTCATTGTTCCAAACATCATTCGGAAATTTTATGGTGACCATATCACACGCATTAAGGGGCT
GACCGCATTAACTGGTTCCTGTCTCATCTTGGTCTGTGATATTGTAGCTCGTCTAGTCATTCGCCCTTACGAAGTTTCCG
TCAGCTTGATTTTAGGAATTTTAGGTAGTTTGGCTTTCGTATATCTTTTATGGCAAGGTGCTGCTCATGAATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SDZ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

38.206

94.953

0.363

Multiple sequence alignment