Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   I3J23_RS15570 Genome accession   NZ_CP065159
Coordinates   3025597..3026253 (+) Length   218 a.a.
NCBI ID   WP_046559486.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain GXU-1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3020597..3031253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I3J23_RS15540 (I3J23_15540) oppF 3021126..3022043 (+) 918 WP_003155037.1 oligopeptide ABC transporter ATP-binding protein OppF -
  I3J23_RS15545 (I3J23_15545) - 3022150..3023337 (+) 1188 WP_003155036.1 putative glycoside hydrolase -
  I3J23_RS15550 (I3J23_15550) - 3023455..3024033 (+) 579 WP_003155035.1 GNAT family N-acetyltransferase -
  I3J23_RS15555 (I3J23_15555) spx 3024212..3024607 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  I3J23_RS15560 (I3J23_15560) - 3024665..3025321 (-) 657 WP_003155033.1 TerC family protein -
  I3J23_RS15565 (I3J23_15565) - 3025504..3025614 (+) 111 Protein_3020 adaptor protein MecA -
  I3J23_RS15570 (I3J23_15570) mecA 3025597..3026253 (+) 657 WP_046559486.1 adaptor protein MecA Regulator
  I3J23_RS15575 (I3J23_15575) - 3026404..3027564 (+) 1161 WP_046559487.1 competence protein CoiA family protein -
  I3J23_RS15580 (I3J23_15580) pepF 3027792..3029621 (+) 1830 WP_088005489.1 oligoendopeptidase F Regulator
  I3J23_RS15585 (I3J23_15585) - 3029659..3029826 (-) 168 WP_003155026.1 hypothetical protein -
  I3J23_RS15590 (I3J23_15590) spxH 3030112..3031014 (-) 903 WP_024085126.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25990.79 Da        Isoelectric Point: 4.1143

>NTDB_id=507569 I3J23_RS15570 WP_046559486.1 3025597..3026253(+) (mecA) [Bacillus amyloliquefaciens strain GXU-1]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFPS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=507569 I3J23_RS15570 WP_046559486.1 3025597..3026253(+) (mecA) [Bacillus amyloliquefaciens strain GXU-1]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTCCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

88.991

100

0.89