Detailed information NTG0507441

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: BTD91_RS09290
• Genome accession: NZ_CP065150
• Coordinates: 2070221..2073610 (-)
• Length: 1129 a.a.
• NCBI ID: WP_077680823.1
• Uniprot ID: -
• Organism: Vibrio kanaloae strain R17
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2065221..2078610

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BTD91_RS09275 (BTD91_09275)	-	2065639..2066664 (-)	1026	WP_017056648.1	ABC transporter permease	-
BTD91_RS09280 (BTD91_09280)	-	2066667..2067653 (-)	987	WP_017056649.1	ABC transporter permease	-
BTD91_RS09285 (BTD91_09285)	-	2067823..2069505 (-)	1683	WP_017056650.1	ABC transporter substrate-binding protein	-
BTD91_RS09290 (BTD91_09290)	chiS	2070221..2073610 (-)	3390	WP_077680823.1	response regulator	Regulator
BTD91_RS09295 (BTD91_09295)	rsmC	2073827..2074849 (-)	1023	WP_077680822.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
BTD91_RS09300 (BTD91_09300)	-	2074959..2076044 (-)	1086	WP_060468551.1	AI-2E family transporter	-
BTD91_RS09305 (BTD91_09305)	hemL	2076388..2077683 (-)	1296	WP_060468550.1	glutamate-1-semialdehyde 2,1-aminomutase	-
BTD91_RS09310 (BTD91_09310)	erpA	2077969..2078310 (+)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127295.87 Da
• Isoelectric Point: 5.4200

>NTDB_id=507441 BTD91_RS09290 WP_077680823.1 2070221..2073610(-) (chiS) [Vibrio kanaloae strain R17]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESNSFIGSERYRLLHKRYHNAYLELLKRSDF
DDILLIDINGNVAYSVSKHDDYGTNLLTGKYKDSNLGTTFQQLKKDVTDRRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGDDHLPRSLAHSQKSINLSLDVVDKALAGETAVGTFDNTQDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVSSHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMQLIRSQNDELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPSNQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGSKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLVQAGQDAG
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQEELQNYSNSGNYSHFQAPDLIDNTQQEDSVINENP
DGPLLVIADDEPVNLRVLDSFLKLEGFRVRTACDGPETIEIIEKEKPELLLLDIMMPGMSGYQVCETLRKQYDHAQLPII
MLTALNQAEDRVRGFEVGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKIEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRIADKASGEGKNKQELMREVLVDAMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=507441 BTD91_RS09290 WP_077680823.1 2070221..2073610(-) (chiS) [Vibrio kanaloae strain R17]
ATGTTTAGATTCTATCGTAAACAGAAGTTTAAGCGCCTTCAAAATACTCTAATGCTGGCATTTCTTGTCCTCAGCATTAC
CCCGGTGACACTAATCGCAATATTCTTCCTCCAGTCGCACAGTCAAGATCTACAGGAACAAAGCACCTCACATCTTGTTT
CGGTTCGTGATACTAAGCAACAGCAAATCGTCGATTACCTTCAAGCTCAAGAGTCCCAAGTCATGGGCTTTGTACGATCA
GAACTGGCTAATGCCAGTGGTGGGCGATTCTATGGATTGATCAATGCATTTCAAAGGCTCGGCCTAGATATTGACGAAGC
ACGTAGCAATGCACAGCAGCGTTATATTCAAGGATCAGGCGATCAAATCAAAACATCTATTCTTCCAGAATCGAACAGTT
TTATTGGCAGTGAGCGTTATCGCCTACTACACAAACGCTACCACAACGCTTACCTAGAACTGCTTAAGCGCTCTGATTTT
GACGATATCTTATTGATTGATATCAACGGTAACGTCGCTTATTCCGTATCTAAGCATGATGATTATGGCACCAATTTACT
GACAGGTAAGTACAAGGATTCAAACCTAGGCACTACCTTTCAACAACTAAAAAAAGACGTAACCGACCGACGCAAATCTA
ATGAGGATTACACGCCTGTTATTGTCTCTGACTTTAAAGACGAGAATGGTAAACAAACAGCATGGTTAGGTGCGCCTATC
GTACAGCAGGGCTATCTGCACAGCTATGCGATGTTTAGATTACCGATCAACGGCATAACGAAACTTATCGCGGATCTCAA
CAAGAGTTCAAATATTCAGACGCTGCTTGTGGGTGATGATCACCTGCCGCGTAGCCTTGCGCATTCGCAAAAATCGATCA
ACTTAAGCCTAGACGTTGTTGATAAAGCGCTTGCGGGCGAAACTGCAGTGGGTACGTTCGATAACACTCAAGATCAAGCG
ATCATCGCTGCCTATACGCCAATTGAACTCAAATATGCAACTTGGGCTCTCGTTGTCGAGCTGCCAGAGAAAGAAGCATT
TGCCCGAATTCACCAGCTAGAAAAGATCTTCGTAATCGTAATGTTAACTGCAATCATTCTTGTATTTGTTTCATCGCATT
ACCTATCCAACTTCATCACATCGCCGCTCCTCAAACTCACTTGGGCAGCCGAGAAAGTATCTGCTGGTGATCTTGATGAA
ACGATGATCAATACCGAGCGAAAAGATGAGATAGGCCGCCTTGCCGTAAGCTTCGAACGAATGCAGCGCTCAATTCGCGA
AAAGATGCAGCTGATAAGAAGCCAGAATGATGAACTTGAGGACAACCTTAAGACCATTCAAAAGCAAAACGAAGAGTTGC
AACTGGCCAACAAACTTAAAGATGAGTTCTTAGCGACGACTTCACACGAACTTAGAACACCACTGCATGGGATGGTTGGT
ATTGCCGAAGCACTAATATCTGGTGCGAACGGTCCAATTCCATCTAACCAGAAATACCAGCTAGATATCATCATTAATAG
TGGTCAGAGGCTAGCAACACTGGTTGATGACCTGCTTGATTACCACAAAATGCGCTACGGCAGCTTGGATATAAAGAAAT
CTGCGGTTGATCTGTCTGCAGCCACCAGCTTGGTGCTTGAGCTGTCACATCACCTGCTGGGTAGTAAACCAATCCGCATT
ATTAACCAAGTTCCTAGTGATTTGGGGCTAGTTTCATCTGACCCTCAACGCCTTGAGCAAGTGATGTATAACTTGGTCGG
TAATGCCATCAAGTACACATCAGAAGGTAAGATTGTCATCTCTGCAAGCGTTATTGACGACAACATTCGCGTGCAAGTTG
TTGATACCGGACAAGGTATACCCGCTGAGTATCTAGAGCACATCTTTGAACCCTTAGTTCAAGCAGGTCAAGATGCAGGC
AACTATCGTCAAGGTGCAGGGCTTGGGTTATCCATTAGCCGTCAACTGATTGAGCTTATGGGCGGGTCACTTTACGTAAG
TAGTCAACCGATGCTTGGCACTACCTTCAGCTTTACGCTACCTTTAGCTACGCAAGAAGAATTGCAGAACTACAGCAATT
CTGGCAACTACTCACACTTTCAAGCTCCAGATTTAATTGATAATACTCAACAAGAAGACAGCGTTATCAATGAAAACCCT
GACGGCCCACTCTTAGTAATCGCAGATGATGAGCCAGTAAACCTAAGAGTATTAGACAGTTTCTTGAAGTTAGAAGGTTT
TCGAGTTCGTACCGCATGTGACGGCCCAGAAACCATTGAAATAATTGAAAAAGAGAAGCCTGAATTACTTCTACTCGACA
TCATGATGCCTGGTATGAGTGGCTACCAGGTTTGTGAGACACTGCGTAAACAATATGACCATGCACAGTTACCAATTATC
ATGCTTACGGCGCTTAACCAGGCAGAGGACCGAGTGCGAGGCTTCGAAGTCGGAGCCAATGACTACTTATCCAAGCCATT
CAACAAACAAGAGTTAGCCGCTCGAATTACTGCGCACCTATCAGCAAGCAAAGCTGAGCAAAGACGACTTGAAAATGACC
AACTGCAACTAGAGCTTAAACACAGAGCCATGGTTGAAGCTAATTTACTAGAGACACAAGGACGTTTACTAGAACAGTTA
GAATCAGCCCCTGAAGCCATTATATGTATTCGTGATGATCAACGTATTCGCTTCGCCAACGAAGCAGCAGCGAAACTCTT
TAGGCGTGGGCAAGAGCAACTTAAGCGTTCAATGGCTGACGAAATCATTGCTCCTAAGTACCTCAAAATAGAACAAGCCC
ACTACTGCGGTGATATTGATATCTACATAGATGACACACGTCAGCGTATTCCAAGTGATATCCTTAAGCTACCTGAAGGC
TCAGGGCTCGACACCATGTACATCTTCAATGTGGGTGGTGGCGTTAACTCAAACCGAGTCAATAACCTTGAAACGGCGGT
TGAGGCACTTTCAAGCTACGCCTTTGAAGGTGACAAAGATAAGCTCCAACAGCTGAAAGAGCTCGGAGGTGAGTTTACTC
GTATCGCAGATAAAGCGAGCGGTGAAGGTAAAAATAAACAGGAATTAATGCGTGAAGTATTGGTTGATGCGATGACCAAT
GCCATCATTTACTGGGAATCAGTAACAGGTGAAACTAAGTTTGCCTTCGCAGAGAAAAGTGGCTTGTGGCGTGTCTACTT
AGACCGAAGTACACTTCAGACTCGAACACTAGACAAATACCTACGCGTAGAAACCCTACCGAAAACGCCTCGCTGGCGAA
CGGTACTGAGCTCAATCGAATTCATACTGGAACACTGCAAAGAACAGACGCCAGAAAGAACCCACATTGAGATGCTAAGG
GATAAACTGCAGAAACTACTGACCAGTTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• HAMP domain (HAMP) (375-427)

• PAS domain (PAS_8) (880-914)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.731	100	0.757