Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   BTD91_RS01665 Genome accession   NZ_CP065150
Coordinates   409399..410787 (-) Length   462 a.a.
NCBI ID   WP_017056505.1    Uniprot ID   A0A4U2D6J2
Organism   Vibrio kanaloae strain R17     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 404399..415787
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTD91_RS01630 (BTD91_01630) moaE 404637..405110 (-) 474 WP_046222691.1 molybdopterin synthase catalytic subunit MoaE -
  BTD91_RS01635 (BTD91_01635) moaD 405113..405358 (-) 246 WP_017054954.1 molybdopterin synthase sulfur carrier subunit -
  BTD91_RS01640 (BTD91_01640) moaC 405355..405834 (-) 480 WP_017054953.1 cyclic pyranopterin monophosphate synthase MoaC -
  BTD91_RS01645 (BTD91_01645) moaB 405847..406359 (-) 513 WP_010437177.1 molybdenum cofactor biosynthesis protein B -
  BTD91_RS01650 (BTD91_01650) moaA 406716..407705 (-) 990 WP_017056508.1 GTP 3',8-cyclase MoaA -
  BTD91_RS01655 (BTD91_01655) - 408040..408927 (+) 888 WP_017056507.1 YvcK family protein -
  BTD91_RS01660 (BTD91_01660) luxU 409031..409375 (-) 345 WP_077680182.1 quorum-sensing phosphorelay protein LuxU -
  BTD91_RS01665 (BTD91_01665) luxO 409399..410787 (-) 1389 WP_017056505.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  BTD91_RS01670 (BTD91_01670) uvrB 411091..413121 (-) 2031 WP_017056504.1 excinuclease ABC subunit UvrB -
  BTD91_RS01680 (BTD91_01680) rsxA 414068..414646 (+) 579 WP_046222689.1 electron transport complex subunit RsxA -
  BTD91_RS01685 (BTD91_01685) rsxB 414649..415242 (+) 594 WP_046222688.1 electron transport complex subunit RsxB -

Sequence

Protein


Download         Length: 462 a.a.        Molecular weight: 51777.37 Da        Isoelectric Point: 6.5096

>NTDB_id=507413 BTD91_RS01665 WP_017056505.1 409399..410787(-) (luxO) [Vibrio kanaloae strain R17]
MQSKTLDNKSKYLLMVEDTASVAALYRSYLTPLEIDINIVGTGRDAIESLNHRIPDLILLDLRLPDMTGMDVLFAVKQKY
PEVPVIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRITVNNAIRKATKLKNSSENPGNQNYQGFIGSSQTMQQVYRT
IDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADG
GTLFLDELCEMDLELQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGEDVIEIAYSLLGYMSVEEGKAFVRFAQEVLDRFNQYEWPGNVRQLQNVLRNVVVLNNGKEITLNMLPPPLNQPIENRL
RLKEKQNEDITVKDIFPLWITEKTAIEQAIKACDGNIPRAAGFLDVSPSTIYRKLQTWNAKP

Nucleotide


Download         Length: 1389 bp        

>NTDB_id=507413 BTD91_RS01665 WP_017056505.1 409399..410787(-) (luxO) [Vibrio kanaloae strain R17]
ATGCAATCAAAAACGCTAGATAACAAATCAAAGTATTTGTTGATGGTGGAGGATACGGCTTCGGTCGCAGCGTTGTATCG
CTCTTATCTGACACCGCTCGAAATTGATATCAACATTGTTGGCACAGGTCGCGATGCAATTGAGAGTTTGAATCATCGAA
TCCCAGATCTAATTTTGTTAGATCTGCGTCTTCCTGATATGACGGGTATGGACGTACTATTTGCTGTAAAACAAAAATAC
CCTGAAGTCCCCGTTATCTTCATGACGGCTCATGGCTCGATCGATACCGCCGTAGAAGCCATGCGTCATGGTTCTCAAGA
TTTCCTTATTAAACCTTGTGAAGCCGACCGACTCCGTATTACGGTGAATAACGCGATACGCAAAGCCACTAAACTTAAGA
ACAGCTCTGAAAATCCGGGTAATCAAAACTACCAAGGATTCATCGGTAGTAGCCAAACCATGCAGCAGGTTTACCGAACC
ATCGATTCTGCCGCATCAAGTAAGGCGAGTATTTTTATCACAGGTGAAAGTGGTACCGGTAAAGAAGTATGTGCAGAAGC
CATTCATGCAGCGAGTAAGCGTGGTGATAAGCCTTTCATTGCGATTAACTGCGCGGCTATCCCTAAAGATTTGATTGAAA
GTGAGCTGTTTGGCCACGTCAAAGGTGCCTTTACGGGCGCAGCAACCGATCGCCAAGGTGCTGCTGAACTAGCAGATGGT
GGAACCCTGTTCCTCGATGAGTTATGCGAAATGGATCTTGAATTGCAAACCAAGCTTCTGCGTTTCATTCAAACCGGCAC
CTTCCAAAAAGTCGGTTCTTCAAAAATGAAGAGCGTTGATGTGCGCTTTGTTTGCGCGACCAACCGTGACCCTTGGAAAG
AAGTACAAGAAGGTCGCTTTAGAGAAGATTTATACTATCGTTTATACGTGATCCCTCTTCACTTGCCGCCACTGCGTGAG
CGTGGGGAAGATGTCATCGAGATCGCATACTCGTTACTAGGCTACATGTCGGTTGAGGAAGGTAAGGCTTTCGTACGCTT
TGCTCAGGAAGTGTTGGATCGCTTTAATCAATACGAGTGGCCGGGTAACGTTCGTCAGCTACAAAACGTTTTACGAAATG
TGGTGGTATTGAATAATGGTAAAGAGATTACTCTGAACATGCTCCCACCTCCACTGAACCAGCCGATTGAGAATCGTCTG
CGACTGAAAGAGAAGCAGAATGAAGACATCACTGTAAAAGATATTTTCCCATTGTGGATCACTGAGAAAACGGCAATCGA
ACAGGCCATAAAAGCGTGTGACGGTAATATCCCTCGCGCGGCTGGTTTCTTGGATGTCAGTCCATCAACGATTTACCGTA
AATTGCAAACGTGGAATGCGAAGCCGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(14-122)

Bacterial regulatory protein, Fis family (HTH_8)

(418-456)

Sigma-54 interaction domain (Sigma54_activat)

(148-313)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U2D6J2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

86.607

96.97

0.84