Detailed information NTG0507404

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: I0K14_RS24865
• Genome accession: NZ_CP065149
• Coordinates: 4826361..4827710 (-)
• Length: 449 a.a.
• NCBI ID: WP_000879440.1
• Uniprot ID: -
• Organism: Bacillus paranthracis strain Gxun-30
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4821361..4832710

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I0K14_RS24845 (I0K14_24845)	secA	4821687..4824194 (-)	2508	WP_000579381.1	preprotein translocase subunit SecA	-
I0K14_RS24850 (I0K14_24850)	hpf	4824469..4825011 (-)	543	WP_000671190.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
I0K14_RS24855 (I0K14_24855)	cspC	4825333..4825530 (-)	198	WP_001162041.1	cold shock protein CspC	-
I0K14_RS24860 (I0K14_24860)	-	4825657..4826361 (-)	705	WP_001998620.1	ComF family protein	-
I0K14_RS24865 (I0K14_24865)	comFA	4826361..4827710 (-)	1350	WP_000879440.1	ATP-dependent helicase ComFA	Machinery gene
I0K14_RS24870 (I0K14_24870)	-	4827837..4829282 (-)	1446	WP_000499500.1	NlpC/P60 family protein	-
I0K14_RS24875 (I0K14_24875)	-	4829430..4829744 (-)	315	WP_000400857.1	winged helix-turn-helix transcriptional regulator	-
I0K14_RS24880 (I0K14_24880)	-	4829918..4830760 (-)	843	WP_000844764.1	DegV family protein	-
I0K14_RS24885 (I0K14_24885)	-	4831000..4831635 (+)	636	WP_000926683.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51094.63 Da
• Isoelectric Point: 9.7510

>NTDB_id=507404 I0K14_RS24865 WP_000879440.1 4826361..4827710(-) (comFA) [Bacillus paranthracis strain Gxun-30]
MLAGKQLLLEELSSDLRRELSDLKKRGEVVCVQGITKNTSKYICQRCGNIEQRLFASFLCKRCGKACAYCRKCITMGRVS
ECAVLVRGIHERNGDRELNPLQWNGALSIGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELAPRLQEVFPSITVAALYGGSVDHKKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVRQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLIKKYPIFL
FVPHVRYIEEISQLLKGLDNRIDGVHAEDSMRKEKVASFRRGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVMYFHYGKTEAMVRAKKHIQSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=507404 I0K14_RS24865 WP_000879440.1 4826361..4827710(-) (comFA) [Bacillus paranthracis strain Gxun-30]
ATGCTTGCTGGAAAACAGTTGCTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGAGGGG
AGAGGTTGTATGTGTACAAGGTATAACGAAGAATACTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCGGTAAAGCATGCGCGTATTGCCGGAAGTGTATCACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGGATTCATGAAAGAAACGGAGACAGGGAGCTAAATCCATTACAGTGGAATGGGGCTTT
ATCGATTGGTCAGGAGTTGGCGGCGCAAGGAGTTATAGAAGCGATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCGCTCCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGGACTGACGTTGTACTGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCAAGTATAACTGTAGCTGCTTTATACGG
AGGGAGTGTAGATCATAAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCAGATCAAATGTTACAGTATGCAGTTAGGCAAGCAATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGTAATTTCAGAAGAGGGAAACAAAA
AGGTATCATTGTTTCGGGAAGATACCATCGTCACCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGCGTGTTACTACAATGGTTAAAAATGAACTTAATCAAAAAGTATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGTCAGTTGTTGAAAGGGTTGGATAATAGAATCGATGGCGTGCATGC
AGAAGATTCGATGAGAAAAGAAAAAGTAGCATCTTTCAGAAGGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGAGCTGAAGAAGAAATTTTTTCAGAGAGTGCGCTCGTA
CAAATTGCAGGCCGAGCGGGGCGTAGTTTTGAAGAGCCATATGGTGAGGTTATGTATTTTCATTACGGTAAGACAGAGGC
AATGGTACGCGCGAAAAAACATATTCAAAGTATGAACAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (110-254)

• Helicase conserved C-terminal domain (Helicase_C) (314-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.392	93.096	0.488
comFA	Latilactobacillus sakei subsp. sakei 23K	40	90.2	0.361