Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   I0K14_RS19795 Genome accession   NZ_CP065149
Coordinates   3874450..3875244 (-) Length   264 a.a.
NCBI ID   WP_014297988.1    Uniprot ID   A0A1J9YJW5
Organism   Bacillus paranthracis strain Gxun-30     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3869450..3880244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I0K14_RS19770 (I0K14_19770) yqiS 3869684..3870583 (-) 900 WP_000763079.1 phosphate butyryltransferase -
  I0K14_RS19775 (I0K14_19775) - 3870779..3872851 (-) 2073 WP_000811008.1 sigma-54 interaction domain-containing protein -
  I0K14_RS19780 (I0K14_19780) - 3872988..3873221 (+) 234 WP_001190187.1 DUF2627 domain-containing protein -
  I0K14_RS19785 (I0K14_19785) - 3873271..3873999 (-) 729 WP_000172565.1 glycerophosphodiester phosphodiesterase -
  I0K14_RS19790 (I0K14_19790) - 3874050..3874196 (+) 147 WP_001247671.1 YycC family protein -
  I0K14_RS19795 (I0K14_19795) spo0A 3874450..3875244 (-) 795 WP_014297988.1 sporulation transcription factor Spo0A Regulator
  I0K14_RS19800 (I0K14_19800) spoIVB 3875532..3876830 (-) 1299 WP_002028467.1 SpoIVB peptidase -
  I0K14_RS19805 (I0K14_19805) recN 3876949..3878688 (-) 1740 WP_000947749.1 DNA repair protein RecN Machinery gene
  I0K14_RS19810 (I0K14_19810) argR 3878955..3879404 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4719

>NTDB_id=507390 I0K14_RS19795 WP_014297988.1 3874450..3875244(-) (spo0A) [Bacillus paranthracis strain Gxun-30]
MEKIKVCLVDDNKELVSMLESYVAAQEDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=507390 I0K14_RS19795 WP_014297988.1 3874450..3875244(-) (spo0A) [Bacillus paranthracis strain Gxun-30]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
GGATATGGAAGTAATTGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TATTAGATATTATTATGCCACATTTAGATGGGTTAGCTGTACTAGAGAAAATGCGCCATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCGTTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCGTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
GGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATCGATTCTATTTCGTCCTTATTCGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAACTCTGAGTTCATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9YJW5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.273

100

0.822