Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   I0K14_RS05975 Genome accession   NZ_CP065149
Coordinates   1173958..1174134 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus paranthracis strain Gxun-30     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1168958..1179134
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I0K14_RS05955 (I0K14_05955) clpC 1169291..1171891 (+) 2601 WP_000365371.1 ATP-dependent chaperone ClpB Regulator
  I0K14_RS05960 (I0K14_05960) - 1171929..1172111 (-) 183 WP_001211114.1 YjzD family protein -
  I0K14_RS05965 (I0K14_05965) - 1172268..1173002 (+) 735 WP_000028704.1 hypothetical protein -
  I0K14_RS05970 (I0K14_05970) - 1173032..1173904 (+) 873 WP_000486163.1 NAD-dependent epimerase/dehydratase family protein -
  I0K14_RS05975 (I0K14_05975) comZ 1173958..1174134 (+) 177 WP_009879752.1 ComZ family protein Regulator
  I0K14_RS05980 (I0K14_05980) fabH 1174537..1175469 (+) 933 WP_001100541.1 beta-ketoacyl-ACP synthase III -
  I0K14_RS05985 (I0K14_05985) fabF 1175501..1176739 (+) 1239 WP_000412651.1 beta-ketoacyl-ACP synthase II -
  I0K14_RS05990 (I0K14_05990) - 1176846..1177634 (+) 789 WP_000539323.1 DUF2268 domain-containing protein -
  I0K14_RS05995 (I0K14_05995) - 1177778..1178524 (+) 747 WP_000966137.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=507375 I0K14_RS05975 WP_009879752.1 1173958..1174134(+) (comZ) [Bacillus paranthracis strain Gxun-30]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=507375 I0K14_RS05975 WP_009879752.1 1173958..1174134(+) (comZ) [Bacillus paranthracis strain Gxun-30]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586