Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   IRJ20_RS15355 Genome accession   NZ_CP065137
Coordinates   3034676..3035629 (+) Length   317 a.a.
NCBI ID   WP_007409125.1    Uniprot ID   A7Z3B8
Organism   Bacillus sp. A1(2020)     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3029676..3040629
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ20_RS15330 argF 3031494..3032465 (+) 972 WP_039252015.1 ornithine carbamoyltransferase -
  IRJ20_RS15335 - 3032541..3032720 (+) 180 WP_003155070.1 YjzC family protein -
  IRJ20_RS15340 - 3032757..3032942 (-) 186 WP_003155069.1 YjzD family protein -
  IRJ20_RS15345 - 3033203..3033937 (+) 735 WP_015417203.1 hypothetical protein -
  IRJ20_RS15350 - 3034020..3034586 (+) 567 WP_015417204.1 NAD(P) binding enzyme -
  IRJ20_RS15355 med 3034676..3035629 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  IRJ20_RS15360 comZ 3035642..3035833 (+) 192 WP_003155061.1 ComZ family protein Regulator
  IRJ20_RS15365 - 3035862..3036080 (-) 219 WP_007409123.1 hypothetical protein -
  IRJ20_RS15370 - 3036248..3037186 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  IRJ20_RS15375 fabF 3037209..3038447 (+) 1239 WP_015417206.1 beta-ketoacyl-ACP synthase II -
  IRJ20_RS15380 - 3038530..3039315 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  IRJ20_RS15385 - 3039489..3040475 (+) 987 WP_031378493.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35342.99 Da        Isoelectric Point: 4.6686

>NTDB_id=507251 IRJ20_RS15355 WP_007409125.1 3034676..3035629(+) (med) [Bacillus sp. A1(2020)]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=507251 IRJ20_RS15355 WP_007409125.1 3034676..3035629(+) (med) [Bacillus sp. A1(2020)]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAACAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z3B8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785