Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   KTR68_RS04880 Genome accession   NZ_CP077757
Coordinates   991962..992681 (-) Length   239 a.a.
NCBI ID   WP_001217723.1    Uniprot ID   -
Organism   Staphylococcus aureus strain WHC07     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 986962..997681
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KTR68_RS04860 - 987345..987710 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  KTR68_RS04865 yjbH 987733..988539 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  KTR68_RS04870 pepF 988999..990807 (-) 1809 WP_000082725.1 oligoendopeptidase F Regulator
  KTR68_RS04875 coiA 990855..991841 (-) 987 WP_000959292.1 competence protein CoiA Machinery gene
  KTR68_RS04880 mecA 991962..992681 (-) 720 WP_001217723.1 adaptor protein MecA Regulator
  KTR68_RS04885 spxA 993052..993447 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  KTR68_RS04890 trpS 993742..994731 (+) 990 WP_031589556.1 tryptophan--tRNA ligase -
  KTR68_RS04895 opp4C 994773..995654 (-) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  KTR68_RS04900 opp4B 995666..996628 (-) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  KTR68_RS04905 - 996621..997601 (-) 981 WP_000427769.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 239 a.a.        Molecular weight: 28285.17 Da        Isoelectric Point: 4.1548

>NTDB_id=507224 KTR68_RS04880 WP_001217723.1 991962..992681(-) (mecA) [Staphylococcus aureus strain WHC07]
MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPLWIQVHAFEKGVEVTISKSKN
EDMMNMSDDDATDQFDEQVQELLAQTLEGEDQLEELFDQRTKEKEAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHS
NPITTEFEDLLYMVDGTYYYAVHFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYAKIIMSHNVTAQVRRYFPETTE

Nucleotide


Download         Length: 720 bp        

>NTDB_id=507224 KTR68_RS04880 WP_001217723.1 991962..992681(-) (mecA) [Staphylococcus aureus strain WHC07]
ATGAGAATAGAACGAGTAGATGATACAACTGTAAAATTGTTTATAACATATAGCGATATCGAGGCCCGTGGATTTAGTCG
TGAAGATTTATGGACAAATCGCAAACGTGGCGAAGAATTCTTTTGGTCAATGATGGATGAAATTAACGAAGAAGAAGATT
TTGTTGTAGAAGGTCCATTATGGATTCAAGTACATGCCTTTGAAAAAGGTGTCGAAGTCACAATTTCTAAATCTAAAAAT
GAAGATATGATGAATATGTCTGATGATGATGCAACTGATCAATTTGATGAACAAGTTCAAGAATTGTTAGCTCAAACATT
AGAAGGTGAAGATCAATTAGAAGAATTATTCGATCAACGAACAAAAGAAAAAGAAGCTCAAGGTTCTAAACGTCAAAAGT
CTTCAGCACGTAAAAATACAAGAACAATTATTGTGAAATTTAACGATTTAGAAGATGTTATTAATTATGCATATCATAGC
AATCCAATAACTACAGAGTTTGAAGATTTGTTATATATGGTTGATGGTACTTATTATTATGCTGTACATTTTGATAGTCA
TGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATT
TAAATGACTATGCTAAAATAATTATGAGTCATAACGTAACAGCTCAAGTTCGACGTTATTTTCCAGAGACAACTGAATAA

Domains

Predicted by InterProScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-229)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

37.975

99.163

0.377