Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   SANR_RS02625 Genome accession   NC_022239
Coordinates   514291..514977 (+) Length   228 a.a.
NCBI ID   WP_041791067.1    Uniprot ID   -
Organism   Streptococcus anginosus C238     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 509291..519977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS02610 (SANR_0514) - 509995..510255 (-) 261 WP_003034285.1 SemiSWEET family transporter -
  SANR_RS02615 (SANR_0515) metG 510501..512498 (+) 1998 WP_020999503.1 methionine--tRNA ligase -
  SANR_RS02620 (SANR_0516) - 513018..514199 (-) 1182 WP_003034356.1 DUF2974 domain-containing protein -
  SANR_RS02625 braR 514291..514977 (+) 687 WP_041791067.1 response regulator transcription factor Regulator
  SANR_RS02630 (SANR_0517) - 514961..515941 (+) 981 WP_003034278.1 sensor histidine kinase -
  SANR_RS02635 (SANR_0518) - 516064..516822 (+) 759 Protein_488 TraX family protein -
  SANR_RS02640 (SANR_0520) - 517026..517793 (+) 768 WP_003034280.1 ABC transporter ATP-binding protein -
  SANR_RS02645 (SANR_0521) - 517786..519774 (+) 1989 WP_003034352.1 ABC transporter permease -

Sequence


Protein


Download         Length: 228 a.a.        Molecular weight: 26196.55 Da        Isoelectric Point: 5.3804

>NTDB_id=50722 SANR_RS02625 WP_041791067.1 514291..514977(+) (braR) [Streptococcus anginosus C238]
MHKILLVEDNAVIRQQVKKMLEQWGFEVVAVEDFMQVLTIFAKEEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
KDQAMDIVMAINMGGEDFVTKPFDNNVLLAKVQGLLRRSYEFGTDQSLLEYHGVILNLKSMDMMYEGKVITLTKNEFQIL
RVLFEHSGSIVARDDLMKELWNSDFFIDDNTLSVNVARLRKKLEEAGLKNFIETKKGIGYGLTNGLSE

Nucleotide


Download         Length: 687 bp        

>NTDB_id=50722 SANR_RS02625 WP_041791067.1 514291..514977(+) (braR) [Streptococcus anginosus C238]
ATGCACAAGATATTATTAGTAGAAGACAATGCCGTCATTCGCCAACAAGTCAAAAAAATGCTGGAGCAATGGGGATTTGA
AGTGGTTGCAGTAGAGGATTTCATGCAGGTTTTGACGATTTTTGCCAAGGAAGAACCACATCTAGTGCTAATGGATATTG
GTCTCCCACTTTTTAATGGTTATCATTGGTGCCAAGAAATTCGCAAGATTTCTAAAGTGCCCATTATGTTTTTGTCATCA
AAAGACCAAGCAATGGATATCGTTATGGCAATCAATATGGGCGGAGAGGATTTTGTCACGAAACCGTTTGATAACAATGT
TCTTCTCGCTAAAGTGCAAGGGCTGTTGCGGCGGTCTTACGAGTTTGGTACGGATCAAAGTCTGCTGGAATACCATGGCG
TGATTCTCAATCTAAAATCTATGGATATGATGTATGAGGGAAAAGTGATTACACTGACAAAAAATGAATTTCAGATTTTG
CGCGTGTTGTTTGAGCATTCAGGCAGCATTGTCGCCCGCGATGATCTGATGAAAGAGCTCTGGAATAGTGATTTCTTTAT
TGATGACAATACCTTGTCAGTCAATGTGGCACGACTGCGTAAGAAATTAGAAGAAGCAGGGCTCAAGAATTTCATTGAAA
CAAAGAAAGGTATAGGCTACGGATTGACCAATGGATTATCAGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.706

95.614

0.456


Multiple sequence alignment