Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   KTR65_RS02985 Genome accession   NZ_CP077755
Coordinates   611182..611805 (+) Length   207 a.a.
NCBI ID   WP_001208760.1    Uniprot ID   Q93SM0
Organism   Staphylococcus aureus strain WHC09     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 606182..616805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KTR65_RS02955 - 607156..607623 (-) 468 WP_000966142.1 CcdC family protein -
  KTR65_RS02960 - 607717..607815 (-) 99 WP_001789897.1 hypothetical protein -
  KTR65_RS02965 - 607802..608044 (-) 243 WP_031774991.1 YneF family protein -
  KTR65_RS02970 recP/tkt 608322..610310 (-) 1989 WP_000481443.1 transketolase Machinery gene
  KTR65_RS02975 - 610431..610670 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  KTR65_RS02980 sosA 610806..611039 (-) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  KTR65_RS02985 dinR/lexA 611182..611805 (+) 624 WP_001208760.1 transcriptional repressor LexA Regulator
  KTR65_RS02990 - 612185..613201 (-) 1017 WP_172402471.1 CAP domain-containing protein -
  KTR65_RS02995 guaC 613223..614200 (-) 978 WP_000688122.1 GMP reductase -
  KTR65_RS03000 rpsN 614357..614626 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  KTR65_RS03005 rpmG 615080..615229 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23301.46 Da        Isoelectric Point: 4.8811

>NTDB_id=507120 KTR65_RS02985 WP_001208760.1 611182..611805(+) (dinR/lexA) [Staphylococcus aureus strain WHC09]
MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=507120 KTR65_RS02985 WP_001208760.1 611182..611805(+) (dinR/lexA) [Staphylococcus aureus strain WHC09]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAACGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTAGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q93SM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657