Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   VB13_RS00250 Genome accession   NZ_CP077685
Coordinates   33532..34287 (+) Length   251 a.a.
NCBI ID   WP_002986719.1    Uniprot ID   A2RBY9
Organism   Streptococcus pyogenes strain M49 591     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 28532..39287
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VB13_RS00240 (VB13_00255) pcsB 30935..32131 (+) 1197 WP_012560362.1 peptidoglycan hydrolase PcsB -
  VB13_RS00245 (VB13_00260) - 32384..33346 (+) 963 WP_009880326.1 ribose-phosphate diphosphokinase -
  VB13_RS00250 (VB13_00265) recO 33532..34287 (+) 756 WP_002986719.1 DNA repair protein RecO Machinery gene
  VB13_RS00255 (VB13_00270) plsX 34390..35397 (+) 1008 WP_002987696.1 phosphate acyltransferase PlsX -
  VB13_RS00260 (VB13_00275) - 35390..35632 (+) 243 WP_002993445.1 phosphopantetheine-binding protein -
  VB13_RS00265 (VB13_00280) purC 35783..36487 (+) 705 WP_028797123.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29516.97 Da        Isoelectric Point: 6.9077

>NTDB_id=506823 VB13_RS00250 WP_002986719.1 33532..34287(+) (recO) [Streptococcus pyogenes strain M49 591]
MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQPLTIADFIFKLNDTGLSYVVDYSNVNTYRY
INNDIFRLAYASYVLALADAAIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECAICHRTDL
PLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKITFDDLRTISLNKDIKKKLRQFIDELYHDYVGIKLKSKTFI
DNLVKWGDIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=506823 VB13_RS00250 WP_002986719.1 33532..34287(+) (recO) [Streptococcus pyogenes strain M49 591]
ATGCAACTAACAGAATCACTAGGCATCGTTCTTTTTAATAGGAATTATCGAGAAGATGATAAATTAGTCAAAATATTTAC
TGAAGTAGCAGGTAAGCAGATGTTTTTCGTGAAACATATTAGTCGTTCCAAAATGTCCTCAATCATTCAACCACTAACGA
TTGCTGATTTTATTTTCAAGTTAAATGATACAGGCTTGTCTTATGTTGTTGACTATAGTAACGTTAACACTTATCGGTAT
ATTAATAATGATATTTTTCGATTAGCCTATGCTAGTTATGTCTTAGCATTAGCTGATGCTGCGATTGCAGATAATGAATC
AGATTCGCATTTGTTTACGTTTTTGAAAAAAACACTTGATTTGATGGAAGAGGGCCTAGATTATGAAATTTTGACAAATA
TTTTTGAAATTCAGATATTAGATCGTTTTGGTATTAGTCTAAACTTTCATGAGTGTGCCATTTGTCATCGTACTGATTTA
CCACTTGATTTTTCCCATCGTTTTTCAGCTGTACTTTGTTCTGAACATTATTACAAAGACAACCGACGTAATCATTTAGA
TCCAAATGTTATCTACTTGTTGAGTCGATTTCAAAAAATCACATTTGATGATTTGAGAACTATTTCATTGAATAAAGACA
TCAAAAAGAAGCTTCGTCAGTTCATTGATGAGTTGTATCACGACTATGTAGGAATCAAATTAAAAAGTAAAACATTCATT
GATAATTTAGTTAAGTGGGGAGATATTATGAAATGA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(83-237)

Recombination protein O N terminal (RecO_N)

(1-73)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A2RBY9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

60.159

100

0.602