Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   KRR37_RS26255 Genome accession   NZ_CP077652
Coordinates   5820068..5820865 (-) Length   265 a.a.
NCBI ID   WP_019762227.1    Uniprot ID   A0ABY2PL81
Organism   Streptomyces sp. HNA39     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5815068..5825865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRR37_RS26240 (KRR37_26050) - 5815195..5816004 (+) 810 WP_248871520.1 GNAT family N-acetyltransferase -
  KRR37_RS26245 (KRR37_26055) - 5816065..5817984 (+) 1920 WP_248871521.1 IucA/IucC family siderophore biosynthesis protein -
  KRR37_RS26250 (KRR37_26060) - 5818023..5819993 (+) 1971 WP_248871522.1 ATP-dependent DNA helicase -
  KRR37_RS26255 (KRR37_26065) dinR/lexA 5820068..5820865 (-) 798 WP_019762227.1 transcriptional repressor LexA Regulator
  KRR37_RS26260 (KRR37_26070) nrdR 5821362..5821874 (+) 513 WP_018488320.1 transcriptional regulator NrdR -
  KRR37_RS26265 (KRR37_26075) - 5822040..5824934 (+) 2895 WP_127468032.1 vitamin B12-dependent ribonucleotide reductase -
  KRR37_RS26270 (KRR37_26080) - 5824995..5825564 (-) 570 WP_127468031.1 YrhB domain-containing protein -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 28743.49 Da        Isoelectric Point: 7.4761

>NTDB_id=506743 KRR37_RS26255 WP_019762227.1 5820068..5820865(-) (dinR/lexA) [Streptomyces sp. HNA39]
MTTTADSATITARDHRSQSRLEPVHAMNDSLTNTDGPEPGRPGRALPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGY
PPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQPTDTTGKPAASYVPLVGRIAAGGPILA
EESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFRREDGHVWLLPH
NAAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 798 bp        

>NTDB_id=506743 KRR37_RS26255 WP_019762227.1 5820068..5820865(-) (dinR/lexA) [Streptomyces sp. HNA39]
GTGACCACGACCGCAGACAGTGCCACCATCACCGCCCGGGACCACCGCTCCCAGAGCCGACTTGAGCCGGTGCATGCCAT
GAATGACTCACTGACGAACACGGACGGGCCCGAGCCCGGCCGCCCCGGCCGCGCCTTGCCCGGCAGGCCTCCAGGGATCA
GGGCGGACAGCTCGGGGCTCACGGACCGGCAGCGGCGGGTCATCGAGGTCATCCGCGACTCCGTGCAGCGCCGGGGGTAC
CCGCCGTCCATGCGGGAGATCGGTCAGGCGGTGGGCCTGTCCAGCACGTCGTCCGTCGCCCATCAGCTGATGGCCCTGGA
GCGCAAGGGCTTCCTCCGGCGCGACCCGCACCGGCCCCGCGCCTACGAGGTGCGCGGCTCGGACCAGCCCAGCACCCAGC
CGACCGACACGACCGGGAAGCCCGCCGCCTCCTACGTCCCTCTGGTGGGCCGGATCGCCGCCGGTGGGCCGATCCTCGCC
GAGGAGTCGGTCGAGGACGTCTTCCCGCTGCCGCGCCAGCTCGTCGGTGACGGCGAGCTGTTCGTGCTGAAGGTCGTCGG
TGACTCGATGATCGAAGCGGCGATCTGCGACGGCGACTGGGTCACCGTGCGCCGTCAGCCCGTCGCGGAGAACGGGGACA
TCGTCGCCGCGATGCTGGACGGCGAGGCGACCGTGAAGCGATTCCGCCGCGAGGACGGACACGTCTGGCTGCTGCCGCAC
AACGCCGCGTACCAGCCGATCCCCGGTGACGAGGCCACGATCCTCGGCAAGGTGGTGGCGGTGCTGCGGCGGGTGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(58-121)

Peptidase S24-like (Peptidase_S24)

(147-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80

0.37