Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I2437_RS09575 Genome accession   NZ_CP065061
Coordinates   2039439..2040212 (+) Length   257 a.a.
NCBI ID   WP_206157851.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ33     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2034439..2045212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2437_RS09565 (IEMOCGPF_01909) rlmH 2037407..2037886 (-) 480 WP_012678751.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I2437_RS09570 (IEMOCGPF_01910) htrA 2038096..2039319 (+) 1224 WP_012516520.1 trypsin-like peptidase domain-containing protein Regulator
  I2437_RS09575 (IEMOCGPF_01911) spo0J 2039439..2040212 (+) 774 WP_206157851.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29120.69 Da        Isoelectric Point: 9.6561

>NTDB_id=506636 I2437_RS09575 WP_206157851.1 2039439..2040212(+) (spo0J) [Streptococcus equi subsp. zooepidemicus strain SEZ33]
MTEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGERRFKAAKLAGLQKIPAIVK
EISTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHEDIATYMGKSRPYISNTIRLLQLPDVIRQAIEDGTISAG
HARALLSLSTSKEQELYFHNILDQGLSVRQIEQLVKTNHPPKKRNKHKTIFVKSLEKELSKSLGLPVALSLQKNDSGQLQ
LSFSNQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=506636 I2437_RS09575 WP_206157851.1 2039439..2040212(+) (spo0J) [Streptococcus equi subsp. zooepidemicus strain SEZ33]
ATGACAGAAATCCTAATGCACATTCCTATCGAGGATATTGTGGCAAATCCTTATCAACCACGTCTTCAATTTAATCAAAA
AGAGCTTGAGGAGCTGGCACATTCCATTCAGGCTAATGGTTTGATTCAACCAATCATTGTCAGAAAATCTGATGTATTTG
GCTATGAATTAGTCGCTGGAGAACGACGCTTTAAAGCAGCCAAGCTGGCAGGACTTCAAAAGATTCCAGCAATTGTTAAG
GAAATCTCTACTCTTGAGAGCATGCAGCAGGCCATCGTAGAAAACCTACAGCGCTCAAATTTAAATGCTATTGAAGAGGC
TAAGGCCTATCAATTACTTATTGATAAAAATAAGATGACCCATGAGGACATCGCGACATACATGGGAAAATCACGCCCTT
ATATCAGCAACACCATCAGACTGCTGCAATTACCAGACGTTATTAGACAAGCGATTGAGGACGGTACCATTAGCGCCGGC
CATGCAAGAGCTTTATTATCCTTGTCAACATCAAAAGAGCAGGAGCTGTATTTTCACAACATTCTGGATCAAGGCTTAAG
CGTTAGGCAAATCGAACAGCTGGTAAAGACTAACCATCCCCCCAAAAAAAGAAACAAACATAAAACCATTTTTGTGAAGT
CTTTAGAAAAAGAGCTCTCAAAATCATTAGGATTACCTGTGGCATTGTCTCTCCAAAAAAATGACAGTGGGCAGCTGCAA
CTGTCATTTTCAAACCAAGAAGAATTGAACAGAATTATCAACAAGCTGCTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(148-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

62.109

99.611

0.619