Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   I2437_RS06890 Genome accession   NZ_CP065061
Coordinates   1450571..1451608 (-) Length   345 a.a.
NCBI ID   WP_012678320.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ33     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1445571..1456608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2437_RS06865 (IEMOCGPF_01370) - 1445854..1446087 (-) 234 WP_012678314.1 YqgQ family protein -
  I2437_RS06870 (IEMOCGPF_01371) - 1446457..1446987 (-) 531 WP_012515230.1 Dps family protein -
  I2437_RS06875 (IEMOCGPF_01372) - 1447387..1447836 (+) 450 WP_228269161.1 peptidase -
  I2437_RS06880 (IEMOCGPF_01373) rlmN 1448259..1449341 (-) 1083 WP_043029472.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  I2437_RS06885 (IEMOCGPF_01374) - 1449345..1449959 (-) 615 WP_042670293.1 YutD family protein -
  I2437_RS06890 (IEMOCGPF_01375) sepM 1450571..1451608 (-) 1038 WP_012678320.1 SepM family pheromone-processing serine protease Regulator
  I2437_RS06895 (IEMOCGPF_01376) coaD 1451586..1452086 (-) 501 WP_165619171.1 pantetheine-phosphate adenylyltransferase -
  I2437_RS06900 (IEMOCGPF_01377) rsmD 1452076..1452615 (-) 540 WP_012515220.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  I2437_RS06905 (IEMOCGPF_01378) asnA 1452789..1453781 (-) 993 WP_012515219.1 aspartate--ammonia ligase -
  I2437_RS06910 (IEMOCGPF_01379) arcC 1454001..1454951 (-) 951 WP_165626354.1 carbamate kinase -
  I2437_RS06915 (IEMOCGPF_01380) - 1454969..1456300 (-) 1332 WP_043025442.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37472.10 Da        Isoelectric Point: 9.4223

>NTDB_id=506615 I2437_RS06890 WP_012678320.1 1450571..1451608(-) (sepM) [Streptococcus equi subsp. zooepidemicus strain SEZ33]
MKTIKKFKWWLIGFVALLFLLLTLFFPLPYYIEMPGGAYDIRSVLTVNGKEDKEKGAYQFVVVSLSRATLAKLLYAWLTP
FTEISTMEDTTGGYSDADYLRINRFYMETSQNSAVYQALTLAGKEVSFDYKGVYVLDVSKDSSFKGVLHLADTVTGVNGK
TFTTSADLIDYVSHLTLGDEVQVQFTTAGESKTEKGKIIKLKNGKNGIGITLTDHTQVISGDEVDFSTGGVGGPSAGLMF
TLDIYDQINHEDLRKGRVIAGTGTIGKDGKVGDIGGAGLKVAAAAAAGADIFFVPNNPVHKDVKKANPKAISNYEEAKKA
AKRLKTAMKIIPVKTVQDAISYLKK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=506615 I2437_RS06890 WP_012678320.1 1450571..1451608(-) (sepM) [Streptococcus equi subsp. zooepidemicus strain SEZ33]
ATGAAAACAATAAAAAAATTTAAATGGTGGCTGATTGGCTTTGTTGCCTTGCTTTTTCTACTGTTGACACTGTTTTTCCC
CTTGCCTTATTATATTGAAATGCCAGGTGGAGCCTATGATATTCGCTCGGTATTGACTGTCAATGGCAAAGAGGATAAGG
AAAAGGGAGCTTATCAGTTTGTTGTAGTGAGCCTCAGTCGGGCCACCTTGGCTAAATTGCTCTATGCTTGGCTAACGCCT
TTCACTGAGATTAGCACCATGGAAGATACTACTGGTGGCTATAGCGATGCTGACTACCTGCGAATTAATCGCTTTTATAT
GGAAACCTCTCAAAACAGCGCTGTTTATCAGGCCCTTACTCTAGCAGGCAAGGAGGTAAGCTTTGATTATAAGGGTGTTT
ATGTCTTAGACGTCAGCAAGGATTCTAGCTTTAAAGGTGTGCTGCACCTAGCAGATACAGTGACAGGTGTCAATGGTAAA
ACATTTACAACGTCTGCCGATCTGATTGATTATGTTTCTCATTTGACCTTGGGAGATGAGGTGCAGGTACAATTTACAAC
CGCTGGTGAGTCAAAGACTGAAAAAGGAAAGATTATTAAGCTTAAAAACGGTAAAAATGGGATTGGCATTACCCTGACAG
ACCACACACAGGTCATTTCTGGTGATGAGGTCGACTTTAGCACCGGAGGTGTGGGTGGACCAAGTGCAGGCTTGATGTTT
ACTCTTGATATTTATGATCAAATCAATCACGAAGACTTGCGCAAGGGACGTGTGATTGCTGGTACAGGAACCATTGGCAA
GGATGGAAAAGTTGGAGATATTGGCGGGGCGGGCCTAAAGGTGGCTGCCGCCGCCGCTGCTGGTGCTGATATTTTCTTTG
TTCCAAATAATCCTGTGCATAAGGACGTCAAAAAAGCAAATCCTAAGGCTATTAGCAATTACGAGGAGGCTAAAAAAGCA
GCTAAACGACTAAAGACAGCAATGAAAATTATTCCTGTGAAAACCGTTCAAGATGCTATAAGCTACCTTAAAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

70.145

100

0.701