Detailed information NTG0506575

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KTN06_RS12930
• Genome accession: NZ_CP077646
• Coordinates: 2715849..2716832 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain ST866
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2710849..2721832

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KTN06_RS12915 (KTN06_12910)	dppA	2712149..2713756 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KTN06_RS12920 (KTN06_12915)	dppB	2713907..2714926 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
KTN06_RS12925 (KTN06_12920)	dppC	2714936..2715838 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KTN06_RS12930 (KTN06_12925)	amiE	2715849..2716832 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
KTN06_RS12935 (KTN06_12930)	dppF	2716829..2717833 (+)	1005	WP_000107026.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KTN06_RS12940 (KTN06_12935)	yhjV	2717863..2719134 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KTN06_RS12945 (KTN06_12940)	-	2719610..2719717 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KTN06_RS12950 (KTN06_12945)	-	2720093..2720200 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KTN06_RS12955 (KTN06_12950)	-	2720576..2720683 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=506575 KTN06_RS12930 WP_001196486.1 2715849..2716832(+) (amiE) [Escherichia coli strain ST866]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=506575 KTN06_RS12930 WP_001196486.1 2715849..2716832(+) (amiE) [Escherichia coli strain ST866]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404