Detailed information NTG0506507

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: I2435_RS08675
• Genome accession: NZ_CP065059
• Coordinates: 1796620..1797555 (-)
• Length: 311 a.a.
• NCBI ID: WP_021320349.1
• Uniprot ID: A0A922NTU6
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ25
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1791620..1802555

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I2435_RS08650 (JFMEOBDD_01744)	tsaD	1791658..1792674 (-)	1017	WP_012678539.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
I2435_RS08655 (JFMEOBDD_01745)	rimI	1792664..1793089 (-)	426	WP_014622281.1	ribosomal protein S18-alanine N-acetyltransferase	-
I2435_RS08660 (JFMEOBDD_01746)	tsaB	1793092..1793790 (-)	699	WP_165626279.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
I2435_RS08665 (JFMEOBDD_01747)	-	1794076..1794306 (+)	231	WP_014622279.1	DNA-dependent RNA polymerase subunit epsilon	-
I2435_RS08670 (JFMEOBDD_01748)	rnjA	1794308..1795990 (+)	1683	WP_012514941.1	ribonuclease J1	-
I2435_RS08675 (JFMEOBDD_01749)	amiF	1796620..1797555 (-)	936	WP_021320349.1	ATP-binding cassette domain-containing protein	Regulator
I2435_RS08680 (JFMEOBDD_01750)	oppD	1797555..1798601 (-)	1047	WP_012678544.1	ABC transporter ATP-binding protein	Regulator
I2435_RS08685 (JFMEOBDD_01751)	-	1798614..1799645 (-)	1032	WP_012678545.1	ABC transporter permease	-
I2435_RS08690 (JFMEOBDD_01752)	-	1799655..1800569 (-)	915	WP_043052710.1	ABC transporter permease	-
I2435_RS08695 (JFMEOBDD_01753)	-	1800738..1802396 (-)	1659	WP_206156434.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35013.13 Da
• Isoelectric Point: 8.3807

>NTDB_id=506507 I2435_RS08675 WP_021320349.1 1796620..1797555(-) (amiF) [Streptococcus equi subsp. zooepidemicus strain SEZ25]
MTEARKKLIEVKNVSLTFNKGKKNEVKAIDRLSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDISDGEIIFNGENVSQL
KGKKLHSFRKHAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREARVQELLKLVGLNQDHLTRYPHEFSGGQRQ
RIGIARALAVKPTFIIADEPISALDVSIQAQVVSLMQQLQKKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDE
VYNHPIHPYTKSLISAIPEPDPEKERKRIAEVYDPSQELDGQERQMHEITPGHFVLATQAEADQYRAERGL

Nucleotide

• Length: 936 bp

>NTDB_id=506507 I2435_RS08675 WP_021320349.1 1796620..1797555(-) (amiF) [Streptococcus equi subsp. zooepidemicus strain SEZ25]
ATGACAGAAGCTCGTAAAAAATTAATCGAAGTAAAGAATGTTTCCTTAACCTTTAACAAGGGGAAGAAAAACGAGGTTAA
GGCTATTGATCGCCTTAGCTTTGACATTTATGAAGGGGAAGTATTTGGCCTTGTTGGGGAATCAGGCTCAGGCAAGACAA
CAGTTGGTCGAGCTATTTTGAAATTGTATGATATTAGTGATGGTGAGATTATTTTTAATGGAGAAAATGTCTCCCAATTA
AAGGGGAAAAAGCTGCATAGCTTTCGTAAGCATGCGCAAATGATCTTCCAAGATCCTCAGGCTAGTCTCAACGGTCGCAT
GAAAATCAGAGACATTGTTGCAGAGGGCTTAGACATTCATGGCTTGACAGCCTCAAAGGCAGAGCGTGAGGCAAGAGTCC
AAGAGCTGTTAAAGCTTGTTGGGCTCAATCAGGATCATTTGACGCGGTACCCACATGAATTTTCCGGTGGCCAACGCCAG
CGGATTGGCATTGCGCGTGCCCTGGCTGTGAAGCCGACCTTTATTATCGCAGATGAGCCGATTTCAGCGCTTGATGTGTC
GATTCAAGCACAGGTAGTGAGTCTCATGCAGCAATTGCAAAAGAAGCGCGGCTTGACCTATCTCTTTATCGCACATGATT
TGTCTATGGTCAAATACATTTCAGACCGTATTGGTGTGATGCATTGGGGCAAAATGCTTGAGATTGGAACATCTGATGAG
GTTTACAATCACCCGATTCACCCTTATACGAAAAGCTTGATCTCAGCCATTCCTGAGCCGGATCCTGAAAAGGAGCGTAA
GCGCATTGCAGAGGTTTATGATCCTAGTCAAGAGCTAGATGGCCAAGAGCGGCAAATGCATGAAATCACTCCTGGGCATT
TTGTCTTAGCGACGCAGGCCGAAGCCGATCAGTATCGAGCAGAGCGTGGCCTCTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.248	98.392	0.534
amiF	Streptococcus thermophilus LMG 18311	53.922	98.392	0.531
amiF	Streptococcus salivarius strain HSISS4	53.595	98.392	0.527