Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   I2435_RS08030 Genome accession   NZ_CP065059
Coordinates   1654130..1654855 (-) Length   241 a.a.
NCBI ID   WP_012678429.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ25     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1649130..1659855
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2435_RS08005 (JFMEOBDD_01610) rimP 1649615..1650097 (-) 483 WP_042670147.1 ribosome maturation factor RimP -
  I2435_RS08015 (JFMEOBDD_01612) trmB 1651603..1652238 (-) 636 WP_115250646.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I2435_RS08020 (JFMEOBDD_01613) - 1652238..1653029 (-) 792 WP_012515084.1 phosphotransferase family protein -
  I2435_RS08025 (JFMEOBDD_01614) - 1653092..1654126 (-) 1035 WP_043983780.1 ABC transporter permease -
  I2435_RS08030 (JFMEOBDD_01615) pptA 1654130..1654855 (-) 726 WP_012678429.1 ABC transporter ATP-binding protein Regulator
  I2435_RS08035 (JFMEOBDD_01616) - 1655392..1655700 (+) 309 WP_043038651.1 hypothetical protein -
  I2435_RS08040 (JFMEOBDD_01617) - 1656157..1656576 (+) 420 WP_111689882.1 HIT family protein -
  I2435_RS08045 (JFMEOBDD_01618) - 1656573..1656869 (+) 297 WP_012679094.1 hypothetical protein -
  I2435_RS08050 (JFMEOBDD_01619) - 1657039..1658301 (-) 1263 WP_165625996.1 LCP family protein -
  I2435_RS08055 (JFMEOBDD_01620) - 1658302..1658829 (-) 528 WP_014622377.1 GNAT family N-acetyltransferase -
  I2435_RS08060 (JFMEOBDD_01621) tsaE 1658822..1659265 (-) 444 WP_014622376.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26506.80 Da        Isoelectric Point: 4.8615

>NTDB_id=506504 I2435_RS08030 WP_012678429.1 1654130..1654855(-) (pptA) [Streptococcus equi subsp. zooepidemicus strain SEZ25]
MLNIENVTGGYLNIPVLKDISFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLAEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAHKRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAIADLIKALEVEKAKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=506504 I2435_RS08030 WP_012678429.1 1654130..1654855(-) (pptA) [Streptococcus equi subsp. zooepidemicus strain SEZ25]
ATGTTAAACATTGAGAATGTCACTGGAGGCTACCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTTGGAAATGG
AGAGCTAGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCTT
ATAAGGGAAGGATTTCCATTGATGGCTTAACCTTGGCGGAGCATGAAGCTGATTATCGCAAGAAAATTGGCTTTATCCCA
GAAACACCAAGCTTATATGAGGAGCTGACCTTAGCAGAGCATATCAATACGGTAGCTATGGCCTATGATATTGATGTGGA
GCTGGCACATAAGCGAGCTGAGCCCTTCTTAGAGCTGTTTCGTTTGACGGATAAGCTGGATTGGTTTCCAGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGCGCTTTTGTCATTGATCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGGCTTGACCCCTTAGCAATTGCTGATTTGATTAAGGCTTTAGAGGTTGAAAAGGCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGCTTTGTGATATTGCATCAGGGGCAGGTGCGTGCGCAAG
GGACTCTGGCGGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACCTAGCGCTGACAAAAGAG
GGGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.477

99.17

0.739
  pptA Streptococcus thermophilus LMD-9

73.64

99.17

0.73