Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   I2434_RS02915 Genome accession   NZ_CP065058
Coordinates   604856..605893 (+) Length   345 a.a.
NCBI ID   WP_021320489.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ18     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 599856..610893
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2434_RS02890 (MCPGFBBE_00575) - 600168..601499 (+) 1332 WP_206157655.1 dipeptidase -
  I2434_RS02895 (MCPGFBBE_00576) arcC 601517..602467 (+) 951 WP_043029469.1 carbamate kinase -
  I2434_RS02900 (MCPGFBBE_00577) asnA 602687..603679 (+) 993 WP_012515219.1 aspartate--ammonia ligase -
  I2434_RS02905 (MCPGFBBE_00578) rsmD 603849..604388 (+) 540 WP_206157656.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  I2434_RS02910 (MCPGFBBE_00579) coaD 604378..604878 (+) 501 WP_012515221.1 pantetheine-phosphate adenylyltransferase -
  I2434_RS02915 (MCPGFBBE_00580) sepM 604856..605893 (+) 1038 WP_021320489.1 SepM family pheromone-processing serine protease Regulator
  I2434_RS02920 (MCPGFBBE_00581) - 606499..607113 (+) 615 WP_012678319.1 YutD family protein -
  I2434_RS02925 (MCPGFBBE_00582) rlmN 607117..608199 (+) 1083 WP_012515224.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  I2434_RS02930 (MCPGFBBE_00583) - 608622..609071 (-) 450 WP_228269161.1 peptidase -
  I2434_RS02935 (MCPGFBBE_00584) - 609471..610001 (+) 531 WP_012515230.1 Dps family protein -
  I2434_RS02940 (MCPGFBBE_00585) - 610374..610607 (+) 234 WP_012515231.1 YqgQ family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37416.03 Da        Isoelectric Point: 9.2833

>NTDB_id=506415 I2434_RS02915 WP_021320489.1 604856..605893(+) (sepM) [Streptococcus equi subsp. zooepidemicus strain SEZ18]
MKTIKKFKWWLIGLVALLFLLLTLFFPLPYYIEMPGGAYDIRSVLTVNGKEDKEKGAYQFVVVSLSRATLAKLLYAWLTP
FTEISTMEDTTGGYSDADYLRINRFYMETSQNSAVYQALTLAGKEVSFDYKGVYVLDVSKDSSFKGVLHLADTVTGVNGK
TFTTSADLIDYVSHLTLGDEVQVQFTTAGESKTEKGKIIKLKNGKNGIGITLTDHTQVISGDEVDFSTGGVGGPSAGLMF
TLDIYDQINHEDLRKGRVIAGTGTIGKDGKVGDIGGAGLKVAAAAAAGADIFFVPNNPVDKDVKKANPKAISNYEEAKKA
AKRLKTAMKIIPVKTVQDAISYLKK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=506415 I2434_RS02915 WP_021320489.1 604856..605893(+) (sepM) [Streptococcus equi subsp. zooepidemicus strain SEZ18]
ATGAAAACAATAAAAAAATTTAAATGGTGGCTGATTGGCTTAGTTGCCTTGCTTTTTCTACTGTTGACACTGTTTTTCCC
CTTGCCTTATTATATTGAAATGCCGGGTGGAGCCTATGATATTCGCTCGGTATTGACTGTCAATGGCAAAGAGGATAAGG
AAAAGGGAGCTTATCAGTTTGTTGTAGTGAGCCTCAGTCGGGCCACCTTGGCTAAATTGCTCTATGCTTGGCTAACGCCT
TTCACTGAGATTAGCACCATGGAAGATACTACTGGTGGCTATAGCGATGCTGACTACCTGCGAATTAATCGCTTTTATAT
GGAAACCTCTCAAAACAGCGCTGTTTATCAGGCCCTTACTCTAGCAGGCAAGGAGGTAAGCTTTGATTATAAGGGTGTTT
ATGTCTTAGACGTCAGCAAGGATTCTAGCTTTAAAGGTGTGCTGCACCTAGCAGATACAGTGACAGGTGTCAACGGTAAA
ACATTTACAACGTCTGCCGATCTGATTGATTATGTTTCTCATTTGACCTTGGGAGATGAGGTGCAGGTACAATTTACAAC
CGCTGGTGAGTCAAAGACTGAAAAAGGAAAGATTATTAAGCTTAAAAACGGTAAAAATGGGATTGGCATTACCCTGACAG
ACCACACACAGGTCATTTCTGGTGATGAGGTCGACTTTAGCACCGGAGGTGTGGGTGGACCAAGTGCAGGCTTGATGTTT
ACTCTTGATATTTATGATCAAATCAATCACGAAGACTTGCGCAAGGGACGTGTGATTGCTGGTACAGGAACCATTGGCAA
GGATGGAAAAGTTGGAGATATTGGCGGGGCGGGCCTAAAGGTGGCTGCCGCCGCCGCTGCTGGTGCTGATATTTTCTTTG
TTCCAAATAATCCTGTGGATAAGGACGTCAAAAAAGCAAATCCTAAGGCCATTAGCAATTACGAGGAGGCTAAAAAAGCA
GCTAAACGACTAAAGACAGCAATGAAAATTATTCCTGTGAAAACCGTTCAAGATGCTATAAGCTACCTTAAAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

70.145

100

0.701