Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   I2434_RS02245 Genome accession   NZ_CP065058
Coordinates   453930..454655 (+) Length   241 a.a.
NCBI ID   WP_012678429.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ18     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 448930..459655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2434_RS02215 (MCPGFBBE_00439) tsaE 449348..449791 (+) 444 WP_043040146.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  I2434_RS02220 (MCPGFBBE_00440) - 449784..450311 (+) 528 WP_111710372.1 GNAT family N-acetyltransferase -
  I2434_RS02225 (MCPGFBBE_00441) - 450312..451574 (+) 1263 WP_115267099.1 LCP family protein -
  I2434_RS02230 (MCPGFBBE_00442) - 451738..452040 (-) 303 WP_115267098.1 chemotaxis protein -
  I2434_RS02235 (MCPGFBBE_00443) - 452037..452456 (-) 420 WP_111677795.1 HIT family protein -
  I2434_RS02240 (MCPGFBBE_00444) - 452908..453393 (-) 486 WP_206157646.1 hypothetical protein -
  I2434_RS02245 (MCPGFBBE_00445) pptA 453930..454655 (+) 726 WP_012678429.1 ABC transporter ATP-binding protein Regulator
  I2434_RS02250 (MCPGFBBE_00446) - 454659..455693 (+) 1035 WP_165623485.1 ABC transporter permease -
  I2434_RS02255 (MCPGFBBE_00447) - 455756..456547 (+) 792 WP_012515084.1 phosphotransferase family protein -
  I2434_RS02260 (MCPGFBBE_00448) trmB 456547..457182 (+) 636 WP_115250646.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I2434_RS02265 (MCPGFBBE_00449) - 457239..458636 (-) 1398 WP_206157612.1 ISNCY family transposase -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26506.80 Da        Isoelectric Point: 4.8615

>NTDB_id=506412 I2434_RS02245 WP_012678429.1 453930..454655(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain SEZ18]
MLNIENVTGGYLNIPVLKDISFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLAEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAHKRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAIADLIKALEVEKAKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=506412 I2434_RS02245 WP_012678429.1 453930..454655(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain SEZ18]
ATGTTAAACATTGAGAATGTCACTGGAGGCTACCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTTGGAAATGG
AGAGCTAGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCTT
ATAAGGGAAGGATTTCCATTGATGGCTTAACCTTGGCGGAGCATGAAGCTGATTATCGCAAGAAAATTGGCTTTATCCCA
GAAACACCAAGCTTATATGAGGAGCTGACCTTAGCAGAGCATATCAATACGGTAGCTATGGCCTATGATATTGATGTGGA
GCTGGCACATAAGCGAGCTGAGCCCTTCTTAGAGCTGTTTCGCTTGACGGATAAGTTGGATTGGTTTCCGGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGCGCTTTTGTCATTGACCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGGCTTGACCCCTTAGCAATTGCTGATTTGATTAAGGCTTTAGAGGTTGAAAAGGCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGCTTTGTGATATTGCATCAGGGGCAGGTGCGTGCGCAAG
GGACTCTGGCGGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACTTAGCGCTGACAAAAGAG
GGGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.477

99.17

0.739
  pptA Streptococcus thermophilus LMD-9

73.64

99.17

0.73