Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   I2433_RS08195 Genome accession   NZ_CP065056
Coordinates   1692411..1693136 (-) Length   241 a.a.
NCBI ID   WP_043038646.1    Uniprot ID   A0A380JND7
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ14     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1687411..1698136
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2433_RS08170 (JDBNIEOD_01642) - 1688753..1689268 (+) 516 WP_021320424.1 hypothetical protein -
  I2433_RS08180 (JDBNIEOD_01644) trmB 1689884..1690519 (-) 636 WP_111677797.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I2433_RS08185 (JDBNIEOD_01645) - 1690519..1691310 (-) 792 WP_012515084.1 phosphotransferase family protein -
  I2433_RS08190 (JDBNIEOD_01646) pptB 1691373..1692407 (-) 1035 WP_196819877.1 ABC transporter permease Regulator
  I2433_RS08195 (JDBNIEOD_01647) pptA 1692411..1693136 (-) 726 WP_043038646.1 ABC transporter ATP-binding protein Regulator
  I2433_RS08200 (JDBNIEOD_01648) - 1693676..1694062 (+) 387 WP_196819876.1 hypothetical protein -
  I2433_RS08205 (JDBNIEOD_01649) - 1694514..1694933 (+) 420 WP_111677795.1 HIT family protein -
  I2433_RS08210 (JDBNIEOD_01650) - 1694930..1695232 (+) 303 WP_196819875.1 chemotaxis protein -
  I2433_RS08215 (JDBNIEOD_01651) - 1695398..1696660 (-) 1263 WP_196819874.1 LCP family protein -
  I2433_RS08220 (JDBNIEOD_01652) - 1696661..1697188 (-) 528 WP_196819873.1 GNAT family N-acetyltransferase -
  I2433_RS08225 (JDBNIEOD_01653) tsaE 1697181..1697624 (-) 444 WP_043040146.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26636.91 Da        Isoelectric Point: 4.7723

>NTDB_id=506386 I2433_RS08195 WP_043038646.1 1692411..1693136(-) (pptA) [Streptococcus equi subsp. zooepidemicus strain SEZ14]
MLNIENVTGGYLNIPVLKDISFSVANGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLEEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDLELAHRRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIKALEVEKAKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=506386 I2433_RS08195 WP_043038646.1 1692411..1693136(-) (pptA) [Streptococcus equi subsp. zooepidemicus strain SEZ14]
ATGCTAAACATTGAGAATGTCACTGGAGGCTATCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTTGCAAATGG
AGAGCTGGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCAT
ATAAAGGAAGGATTTCCATTGATGGTTTAACCTTGGAAGAGCATGAAGCTGATTATCGTAAGAAAATTGGCTTTATTCCA
GAAACACCAAGCTTATATGAGGAGCTGACTTTAGCAGAGCATATCAATACGGTGGCTATGGCCTATGATATTGATTTGGA
GCTGGCTCATCGGAGAGCTGAGCCTTTCTTAGAGCTGTTTCGCTTGACGGATAAGCTGGATTGGTTTCCGGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGTGCTTTTGTCATTGATCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGACTGGATCCTCTAGCTATTTCGGATTTGATCAAGGCTCTAGAGGTTGAAAAGGCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGTTTTGTGATATTGCATCAGGGGCAGGTGCGTGCGCAAG
GGACTCTGGCTGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACCTAGCACTGACAAAAGAG
GGTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380JND7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.895

99.17

0.743
  pptA Streptococcus thermophilus LMD-9

74.059

99.17

0.734