Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   JGX27_RS05830 Genome accession   NZ_CP077423
Coordinates   1141446..1142108 (-) Length   220 a.a.
NCBI ID   WP_012961975.1    Uniprot ID   -
Organism   Streptococcus gallolyticus subsp. gallolyticus TX20005     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1136446..1147108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JGX27_RS11365 - 1136850..1137410 (+) 561 WP_009854189.1 ABC transporter ATP-binding protein -
  JGX27_RS11370 - 1137398..1138243 (+) 846 WP_009854190.1 ATP-binding cassette domain-containing protein -
  JGX27_RS05815 (JGX27_05815) xerS 1138562..1139632 (+) 1071 WP_003064732.1 tyrosine recombinase XerS Machinery gene
  JGX27_RS05820 (JGX27_05820) - 1139738..1140418 (-) 681 WP_009854191.1 XRE family transcriptional regulator -
  JGX27_RS05825 (JGX27_05825) - 1140502..1141449 (-) 948 WP_009854192.1 sensor histidine kinase -
  JGX27_RS05830 (JGX27_05830) braR 1141446..1142108 (-) 663 WP_012961975.1 response regulator transcription factor Regulator
  JGX27_RS05835 (JGX27_05835) - 1142196..1144175 (-) 1980 WP_009854194.1 FtsX-like permease family protein -
  JGX27_RS05840 (JGX27_05840) - 1144177..1144929 (-) 753 WP_009854195.1 ABC transporter ATP-binding protein -
  JGX27_RS05845 (JGX27_05845) ltrA 1145455..1146732 (-) 1278 WP_009855238.1 group II intron reverse transcriptase/maturase -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 25434.10 Da        Isoelectric Point: 4.8371

>NTDB_id=506325 JGX27_RS05830 WP_012961975.1 1141446..1142108(-) (braR) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
MKQGKIYIVEDDETIVKLLKQHLSQTYDVFSVTNFRAIKQEVEEIKPDLILIDITLPYFNGFYWTTEIRKTMTLPIIFIS
SSDDEMDTVMALNMGGDDFVSKPFSLTILDAKISAFLRRAYQFTSDNYQLDQFSLSRDGILSNGDDHITLSPTENKILAV
LFEHQNQVVPKEELLEKLWENESFIDQNTLSVNITRLRKKTQPLGFDRIHTVRGVGYLLK

Nucleotide


Download         Length: 663 bp        

>NTDB_id=506325 JGX27_RS05830 WP_012961975.1 1141446..1142108(-) (braR) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
ATGAAACAAGGAAAGATTTATATTGTCGAGGACGATGAAACTATCGTTAAACTTTTAAAACAACATCTTAGTCAAACTTA
TGATGTCTTTAGTGTCACTAATTTTCGAGCTATCAAGCAGGAAGTCGAAGAAATCAAACCTGACCTTATCCTGATTGATA
TCACGTTGCCGTATTTTAATGGTTTTTATTGGACAACAGAAATTCGTAAAACCATGACATTGCCGATTATTTTTATCTCA
TCTAGTGATGATGAAATGGATACTGTCATGGCACTTAACATGGGAGGGGATGATTTTGTGTCAAAACCATTTTCTCTAAC
GATTTTAGACGCCAAAATTTCAGCCTTTTTAAGACGTGCTTACCAGTTTACCTCGGATAATTACCAATTGGACCAGTTTT
CTCTGTCGCGTGACGGAATTTTATCAAACGGTGACGACCATATCACCTTATCTCCGACAGAAAATAAGATTTTAGCGGTT
CTCTTTGAACATCAAAATCAAGTCGTGCCCAAAGAGGAATTACTCGAGAAACTTTGGGAAAATGAAAGTTTCATTGACCA
AAATACCCTTAGCGTTAACATAACACGACTGCGCAAGAAAACACAACCATTAGGTTTTGATCGTATTCACACCGTGAGAG
GAGTTGGCTACCTTCTAAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-219)

Response regulator receiver domain (Response_reg)

(6-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

46.33

99.091

0.459
  vicR Streptococcus mutans UA159

34.322

100

0.368