Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   I2432_RS02460 Genome accession   NZ_CP065054
Coordinates   494773..495498 (+) Length   241 a.a.
NCBI ID   WP_012678429.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ13     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 489773..500498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2432_RS02430 (LJFMMFNO_00488) tsaE 490363..490806 (+) 444 WP_014622376.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  I2432_RS02435 (LJFMMFNO_00489) - 490799..491326 (+) 528 WP_014622377.1 GNAT family N-acetyltransferase -
  I2432_RS02440 (LJFMMFNO_00490) - 491327..492589 (+) 1263 WP_165625996.1 LCP family protein -
  I2432_RS02445 (LJFMMFNO_00491) - 492759..493055 (-) 297 WP_012679094.1 hypothetical protein -
  I2432_RS02450 (LJFMMFNO_00492) - 493052..493471 (-) 420 WP_111689882.1 HIT family protein -
  I2432_RS02455 (LJFMMFNO_00493) - 493928..494236 (-) 309 WP_043038651.1 hypothetical protein -
  I2432_RS02460 (LJFMMFNO_00494) pptA 494773..495498 (+) 726 WP_012678429.1 ABC transporter ATP-binding protein Regulator
  I2432_RS02465 (LJFMMFNO_00495) - 495502..496536 (+) 1035 WP_043983780.1 ABC transporter permease -
  I2432_RS02470 (LJFMMFNO_00496) - 496599..497390 (+) 792 WP_012515084.1 phosphotransferase family protein -
  I2432_RS02475 (LJFMMFNO_00497) trmB 497390..498025 (+) 636 WP_115250646.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I2432_RS02485 (LJFMMFNO_00499) rimP 499531..500013 (+) 483 WP_042670147.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26506.80 Da        Isoelectric Point: 4.8615

>NTDB_id=506291 I2432_RS02460 WP_012678429.1 494773..495498(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain SEZ13]
MLNIENVTGGYLNIPVLKDISFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLAEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAHKRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAIADLIKALEVEKAKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=506291 I2432_RS02460 WP_012678429.1 494773..495498(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain SEZ13]
ATGTTAAACATTGAGAATGTCACTGGAGGCTACCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTTGGAAATGG
AGAGCTAGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCTT
ATAAGGGAAGGATTTCCATTGATGGCTTAACCTTGGCGGAGCATGAAGCTGATTATCGCAAGAAAATTGGCTTTATCCCA
GAAACACCAAGCTTATATGAGGAGCTGACCTTAGCAGAGCATATCAATACGGTAGCTATGGCCTATGATATTGATGTGGA
GCTGGCACATAAGCGAGCTGAGCCCTTCTTAGAGCTGTTTCGTTTGACGGATAAGCTGGATTGGTTTCCAGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGCGCTTTTGTCATTGATCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGGCTTGACCCCTTAGCAATTGCTGATTTGATTAAGGCTTTAGAGGTTGAAAAGGCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGCTTTGTGATATTGCATCAGGGGCAGGTGCGTGCGCAAG
GGACTCTGGCGGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACCTAGCGCTGACAAAAGAG
GGGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.477

99.17

0.739
  pptA Streptococcus thermophilus LMD-9

73.64

99.17

0.73