Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | I2432_RS00870 | Genome accession | NZ_CP065054 |
| Coordinates | 149938..152379 (+) | Length | 813 a.a. |
| NCBI ID | WP_206158908.1 | Uniprot ID | - |
| Organism | Streptococcus equi subsp. zooepidemicus strain SEZ13 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 144938..157379
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I2432_RS00840 (LJFMMFNO_00167) | rpsB | 145127..145897 (-) | 771 | WP_012677249.1 | 30S ribosomal protein S2 | - |
| I2432_RS00845 (LJFMMFNO_00168) | ahpF | 146357..147889 (-) | 1533 | WP_206158907.1 | alkyl hydroperoxide reductase subunit F | - |
| I2432_RS00850 (LJFMMFNO_00169) | ahpC | 147910..148470 (-) | 561 | WP_012514798.1 | alkyl hydroperoxide reductase subunit C | - |
| I2432_RS00860 (LJFMMFNO_00171) | - | 149102..149305 (+) | 204 | WP_012514799.1 | cold-shock protein | - |
| I2432_RS00865 (LJFMMFNO_00172) | - | 149477..149938 (+) | 462 | WP_012514800.1 | CtsR family transcriptional regulator | - |
| I2432_RS00870 (LJFMMFNO_00173) | clpC | 149938..152379 (+) | 2442 | WP_206158908.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| I2432_RS10450 | - | 152720..152865 (-) | 146 | Protein_137 | putative holin-like toxin | - |
| I2432_RS00880 (LJFMMFNO_00174) | - | 153146..153577 (+) | 432 | WP_206158909.1 | hypothetical protein | - |
| I2432_RS00885 (LJFMMFNO_00175) | - | 153579..154868 (+) | 1290 | WP_206158910.1 | hypothetical protein | - |
| I2432_RS00890 (LJFMMFNO_00176) | - | 154850..155242 (+) | 393 | WP_206158911.1 | hypothetical protein | - |
| I2432_RS00895 (LJFMMFNO_00177) | - | 155223..155513 (+) | 291 | WP_206158912.1 | hypothetical protein | - |
| I2432_RS00900 (LJFMMFNO_00178) | groES | 155812..156099 (+) | 288 | WP_012514806.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 90403.34 Da Isoelectric Point: 6.6112
>NTDB_id=506285 I2432_RS00870 WP_206158908.1 149938..152379(+) (clpC) [Streptococcus equi subsp. zooepidemicus strain SEZ13]
MMTYSLKMQDIFNQAQFQAERFDSPYLETWHILLAMVAVDHSLAAMVLSEFERKIRAEEYEAAAILAMGKSPKEVTSVQF
KPQSKALSEILAFAHAICQVTNEHEVGSEHVLFAILLNPDIMASRLLELAGYRLKDSGKGEPRFADLRKAIELNAGYSKE
TIKAIHELRKPKKSKSVGTFSEMIKPQSTAGELSDFTRDLTEMARQGLLEPVIGREKEVLRMVQVLCRKTKNNPVLVGDA
GVGKTALAYGLAQRIANGVIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQLIDDIEADGKIILFVDELHTIMGSGSG
IDSTLDAANILKPALSRGTLHMVGATTQEEYQKHIEKDAALSRRFAKILIEEPSVEDAYQILLGLKPSYEQYHNVTISDT
AVHTAVKLARRYLTSKQLPDSAIDLLDEASAMVQSMVKKTQPDFITPLDQALLDGDMSKVSALLAKEDKQPKLKPTAVTE
DDMLHTLSKLSGIPLEKLTQADSKKYLNLEKKLHKRVVGQEMAVSAIARAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYAVLLFDEVEKAHPDIFNILLQV
LDDGMLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKAIGHDHQAMEKRILEELKKAYRPEFINRIDEKVVFHS
LTQENMRDVVKIMVKPLIAALAEKHISLKFQPSALKYLSEAGYDVEMGARPLRRTLQTEVEDRLAELMLSGELSSGQSLK
IGVSRGKLAFDIA
MMTYSLKMQDIFNQAQFQAERFDSPYLETWHILLAMVAVDHSLAAMVLSEFERKIRAEEYEAAAILAMGKSPKEVTSVQF
KPQSKALSEILAFAHAICQVTNEHEVGSEHVLFAILLNPDIMASRLLELAGYRLKDSGKGEPRFADLRKAIELNAGYSKE
TIKAIHELRKPKKSKSVGTFSEMIKPQSTAGELSDFTRDLTEMARQGLLEPVIGREKEVLRMVQVLCRKTKNNPVLVGDA
GVGKTALAYGLAQRIANGVIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQLIDDIEADGKIILFVDELHTIMGSGSG
IDSTLDAANILKPALSRGTLHMVGATTQEEYQKHIEKDAALSRRFAKILIEEPSVEDAYQILLGLKPSYEQYHNVTISDT
AVHTAVKLARRYLTSKQLPDSAIDLLDEASAMVQSMVKKTQPDFITPLDQALLDGDMSKVSALLAKEDKQPKLKPTAVTE
DDMLHTLSKLSGIPLEKLTQADSKKYLNLEKKLHKRVVGQEMAVSAIARAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYAVLLFDEVEKAHPDIFNILLQV
LDDGMLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKAIGHDHQAMEKRILEELKKAYRPEFINRIDEKVVFHS
LTQENMRDVVKIMVKPLIAALAEKHISLKFQPSALKYLSEAGYDVEMGARPLRRTLQTEVEDRLAELMLSGELSSGQSLK
IGVSRGKLAFDIA
Nucleotide
Download Length: 2442 bp
>NTDB_id=506285 I2432_RS00870 WP_206158908.1 149938..152379(+) (clpC) [Streptococcus equi subsp. zooepidemicus strain SEZ13]
GTGATGACTTATTCATTAAAGATGCAAGACATTTTTAATCAGGCTCAATTTCAGGCAGAGCGCTTTGATAGTCCCTACCT
TGAGACCTGGCACATTTTATTAGCTATGGTAGCCGTTGATCATTCTTTAGCAGCCATGGTTTTAAGCGAATTTGAACGAA
AGATCAGAGCTGAAGAGTATGAGGCAGCTGCCATTTTAGCTATGGGAAAAAGTCCCAAGGAGGTGACTTCTGTCCAATTC
AAGCCGCAATCCAAGGCCTTATCAGAAATACTAGCATTTGCGCATGCTATCTGTCAGGTTACCAATGAGCATGAGGTTGG
CTCAGAGCATGTGCTTTTTGCTATTTTGCTCAATCCGGACATTATGGCTAGTCGTCTGTTAGAATTGGCAGGCTATAGGC
TTAAGGATTCTGGCAAGGGAGAGCCTAGGTTTGCGGATTTGCGTAAGGCAATTGAGCTAAATGCCGGCTATAGTAAGGAA
ACCATTAAGGCGATTCATGAGTTGCGTAAGCCTAAAAAGAGTAAATCAGTAGGCACCTTTTCTGAAATGATCAAGCCACA
GAGTACAGCTGGTGAGCTATCAGACTTTACTAGAGACCTGACAGAGATGGCAAGACAGGGCTTGTTAGAGCCAGTTATCG
GACGAGAAAAAGAAGTGTTACGTATGGTTCAGGTGCTCTGTCGTAAGACTAAAAATAATCCTGTTCTTGTTGGTGATGCT
GGTGTTGGAAAAACTGCTCTAGCTTATGGCTTGGCACAGCGTATTGCAAACGGCGTGATTCCTTATGAATTACAGGACAT
GCGTGTCTTGGAGCTTGACATGATGAGTGTGGTTGCAGGTACCCGTTTTCGTGGGGATTTTGAAGAGCGCATGAATCAAC
TCATTGACGATATTGAAGCAGATGGCAAAATCATCTTGTTTGTCGATGAGCTACATACCATTATGGGATCAGGAAGTGGT
ATTGACAGCACTCTTGATGCAGCTAATATTCTAAAGCCAGCCCTTTCTCGCGGTACCCTGCATATGGTTGGTGCTACAAC
TCAAGAGGAATATCAAAAGCATATTGAAAAGGACGCAGCCCTTTCTCGTCGCTTTGCCAAAATATTGATTGAGGAGCCTA
GTGTTGAGGACGCTTATCAGATTTTGCTTGGCTTGAAGCCTTCCTATGAACAGTACCATAATGTAACAATCTCTGATACA
GCTGTCCATACTGCTGTGAAGCTGGCTCGGCGCTATTTGACAAGTAAGCAGCTTCCAGACTCAGCGATTGATCTGCTTGA
TGAAGCCAGTGCGATGGTGCAAAGTATGGTTAAAAAGACGCAGCCTGACTTTATAACACCGCTTGATCAAGCCCTGCTTG
ATGGTGATATGAGCAAGGTGTCAGCCCTTTTAGCCAAAGAGGATAAGCAACCAAAGCTAAAACCAACAGCAGTCACTGAA
GATGATATGTTACACACCTTAAGCAAGCTATCAGGTATTCCCCTAGAAAAACTAACTCAGGCGGATAGTAAAAAATACCT
GAATCTGGAAAAGAAATTGCATAAGCGTGTTGTTGGTCAGGAAATGGCTGTTTCTGCTATTGCACGAGCCATTCGTCGTA
ACCAGTCAGGCATTCGCACAGGCAGGCGTCCGATTGGCTCCTTTATGTTTCTTGGTCCAACTGGTGTCGGAAAAACAGAG
CTAGCAAAGGCCTTGGCCGAATTACTCTTTGATGATGAGTCAGCCCTTATTCGTTTTGATATGTCTGAGTACATGGAAAA
ATTTGCAGCCTCCCGTCTTAATGGGGCTCCTCCTGGCTATGTTGGCTATGATGAGGGAGGAGAGCTAACCGAAAAGGTTA
GAAATAAGCCTTATGCCGTTCTTCTTTTTGATGAGGTTGAAAAGGCTCACCCAGACATCTTTAATATCCTGCTGCAGGTC
CTTGATGATGGTATGTTAACAGATAGTCGTGGACGTAAGGTTGATTTTTCAAACACGATTATTATCATGACGAGCAACCT
AGGAGCAACTGCTCTAAGAGATGATAAGACGGTTGGATTTGGCGCTAAAGCGATCGGTCATGATCATCAAGCAATGGAAA
AGCGTATTTTAGAGGAATTGAAAAAGGCTTATCGGCCTGAATTTATCAACAGAATTGATGAGAAGGTGGTCTTCCATAGC
CTAACACAGGAAAACATGCGTGATGTGGTGAAAATTATGGTTAAGCCGCTGATTGCAGCCTTGGCAGAAAAGCATATTAG
CCTTAAGTTCCAGCCATCAGCTCTCAAGTACTTGTCTGAAGCTGGTTACGATGTTGAAATGGGCGCTCGCCCACTTCGTC
GCACCTTGCAAACAGAGGTTGAGGACAGGTTAGCAGAATTAATGCTGTCAGGAGAGTTATCAAGCGGTCAAAGCCTCAAG
ATTGGTGTATCACGTGGGAAGCTAGCTTTTGATATCGCTTAA
GTGATGACTTATTCATTAAAGATGCAAGACATTTTTAATCAGGCTCAATTTCAGGCAGAGCGCTTTGATAGTCCCTACCT
TGAGACCTGGCACATTTTATTAGCTATGGTAGCCGTTGATCATTCTTTAGCAGCCATGGTTTTAAGCGAATTTGAACGAA
AGATCAGAGCTGAAGAGTATGAGGCAGCTGCCATTTTAGCTATGGGAAAAAGTCCCAAGGAGGTGACTTCTGTCCAATTC
AAGCCGCAATCCAAGGCCTTATCAGAAATACTAGCATTTGCGCATGCTATCTGTCAGGTTACCAATGAGCATGAGGTTGG
CTCAGAGCATGTGCTTTTTGCTATTTTGCTCAATCCGGACATTATGGCTAGTCGTCTGTTAGAATTGGCAGGCTATAGGC
TTAAGGATTCTGGCAAGGGAGAGCCTAGGTTTGCGGATTTGCGTAAGGCAATTGAGCTAAATGCCGGCTATAGTAAGGAA
ACCATTAAGGCGATTCATGAGTTGCGTAAGCCTAAAAAGAGTAAATCAGTAGGCACCTTTTCTGAAATGATCAAGCCACA
GAGTACAGCTGGTGAGCTATCAGACTTTACTAGAGACCTGACAGAGATGGCAAGACAGGGCTTGTTAGAGCCAGTTATCG
GACGAGAAAAAGAAGTGTTACGTATGGTTCAGGTGCTCTGTCGTAAGACTAAAAATAATCCTGTTCTTGTTGGTGATGCT
GGTGTTGGAAAAACTGCTCTAGCTTATGGCTTGGCACAGCGTATTGCAAACGGCGTGATTCCTTATGAATTACAGGACAT
GCGTGTCTTGGAGCTTGACATGATGAGTGTGGTTGCAGGTACCCGTTTTCGTGGGGATTTTGAAGAGCGCATGAATCAAC
TCATTGACGATATTGAAGCAGATGGCAAAATCATCTTGTTTGTCGATGAGCTACATACCATTATGGGATCAGGAAGTGGT
ATTGACAGCACTCTTGATGCAGCTAATATTCTAAAGCCAGCCCTTTCTCGCGGTACCCTGCATATGGTTGGTGCTACAAC
TCAAGAGGAATATCAAAAGCATATTGAAAAGGACGCAGCCCTTTCTCGTCGCTTTGCCAAAATATTGATTGAGGAGCCTA
GTGTTGAGGACGCTTATCAGATTTTGCTTGGCTTGAAGCCTTCCTATGAACAGTACCATAATGTAACAATCTCTGATACA
GCTGTCCATACTGCTGTGAAGCTGGCTCGGCGCTATTTGACAAGTAAGCAGCTTCCAGACTCAGCGATTGATCTGCTTGA
TGAAGCCAGTGCGATGGTGCAAAGTATGGTTAAAAAGACGCAGCCTGACTTTATAACACCGCTTGATCAAGCCCTGCTTG
ATGGTGATATGAGCAAGGTGTCAGCCCTTTTAGCCAAAGAGGATAAGCAACCAAAGCTAAAACCAACAGCAGTCACTGAA
GATGATATGTTACACACCTTAAGCAAGCTATCAGGTATTCCCCTAGAAAAACTAACTCAGGCGGATAGTAAAAAATACCT
GAATCTGGAAAAGAAATTGCATAAGCGTGTTGTTGGTCAGGAAATGGCTGTTTCTGCTATTGCACGAGCCATTCGTCGTA
ACCAGTCAGGCATTCGCACAGGCAGGCGTCCGATTGGCTCCTTTATGTTTCTTGGTCCAACTGGTGTCGGAAAAACAGAG
CTAGCAAAGGCCTTGGCCGAATTACTCTTTGATGATGAGTCAGCCCTTATTCGTTTTGATATGTCTGAGTACATGGAAAA
ATTTGCAGCCTCCCGTCTTAATGGGGCTCCTCCTGGCTATGTTGGCTATGATGAGGGAGGAGAGCTAACCGAAAAGGTTA
GAAATAAGCCTTATGCCGTTCTTCTTTTTGATGAGGTTGAAAAGGCTCACCCAGACATCTTTAATATCCTGCTGCAGGTC
CTTGATGATGGTATGTTAACAGATAGTCGTGGACGTAAGGTTGATTTTTCAAACACGATTATTATCATGACGAGCAACCT
AGGAGCAACTGCTCTAAGAGATGATAAGACGGTTGGATTTGGCGCTAAAGCGATCGGTCATGATCATCAAGCAATGGAAA
AGCGTATTTTAGAGGAATTGAAAAAGGCTTATCGGCCTGAATTTATCAACAGAATTGATGAGAAGGTGGTCTTCCATAGC
CTAACACAGGAAAACATGCGTGATGTGGTGAAAATTATGGTTAAGCCGCTGATTGCAGCCTTGGCAGAAAAGCATATTAG
CCTTAAGTTCCAGCCATCAGCTCTCAAGTACTTGTCTGAAGCTGGTTACGATGTTGAAATGGGCGCTCGCCCACTTCGTC
GCACCTTGCAAACAGAGGTTGAGGACAGGTTAGCAGAATTAATGCTGTCAGGAGAGTTATCAAGCGGTCAAAGCCTCAAG
ATTGGTGTATCACGTGGGAAGCTAGCTTTTGATATCGCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus mutans UA159 |
74.416 |
100 |
0.744 |
| clpC | Streptococcus thermophilus LMD-9 |
71.814 |
100 |
0.721 |
| clpC | Streptococcus thermophilus LMG 18311 |
71.569 |
100 |
0.718 |
| clpC | Streptococcus pneumoniae Rx1 |
65.602 |
100 |
0.657 |
| clpC | Streptococcus pneumoniae D39 |
65.602 |
100 |
0.657 |
| clpC | Streptococcus pneumoniae TIGR4 |
65.479 |
100 |
0.656 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.507 |
100 |
0.499 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.832 |
100 |
0.45 |
| clpE | Streptococcus mutans UA159 |
45.511 |
79.459 |
0.362 |