Detailed information NTG0506247

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: IVB58_RS16670
• Genome accession: NZ_CP065051
• Coordinates: 3521114..3522172 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain 2016GDAB1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3516114..3527172

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IVB58_RS16645 (IVB58_16595)	aroK	3516389..3516958 (-)	570	WP_000643712.1	shikimate kinase AroK	-
IVB58_RS16650 (IVB58_16600)	pilQ	3516970..3519135 (-)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
IVB58_RS16655 (IVB58_16605)	pilP	3519198..3519725 (-)	528	WP_000695069.1	pilus assembly protein PilP	Machinery gene
IVB58_RS16660 (IVB58_16610)	pilO	3519736..3520476 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
IVB58_RS16665 (IVB58_16615)	pilN	3520473..3521114 (-)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
IVB58_RS16670 (IVB58_16620)	pilM	3521114..3522172 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
IVB58_RS16675 (IVB58_16625)	ponA	3522334..3524889 (+)	2556	WP_046023732.1	penicillin-binding protein PBP1a	-
IVB58_RS16680 (IVB58_16630)	-	3524907..3525731 (-)	825	WP_094081296.1	putative RNA methyltransferase	-
IVB58_RS16685 (IVB58_16635)	-	3525734..3526066 (-)	333	WP_000169602.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=506247 IVB58_RS16670 WP_002014066.1 3521114..3522172(-) (pilM) [Acinetobacter baumannii strain 2016GDAB1]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=506247 IVB58_RS16670 WP_002014066.1 3521114..3522172(-) (pilM) [Acinetobacter baumannii strain 2016GDAB1]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423